BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030331
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_654227.1| cytochrome b6/f complex subunit V [Oryza sativa...    97   1e-18
ref|XP_003628180.1| Cytochrome b6/f complex subunit V [Medicago ...    96   4e-18
ref|XP_003606014.1| Cytochrome b6/f complex subunit V, partial [...    89   5e-16
ref|XP_003605588.1| Photosystem I P700 chlorophyll a apoprotein ...    87   2e-15
gb|AFU94573.1| PetG, partial (chloroplast) [Phyllanthus urinaria]      74   1e-11

>ref|YP_654227.1| cytochrome b6/f complex subunit V [Oryza sativa Indica Group]
           gi|42795500|gb|AAS46067.1| cytochrome b6/f complex
           subunit V [Oryza sativa Indica Group]
           gi|42795567|gb|AAS46133.1| cytochrome b6/f complex
           subunit V [Oryza sativa Japonica Group]
           gi|42795631|gb|AAS46196.1| cytochrome b6/f complex
           subunit V [Oryza sativa Japonica Group]
          Length = 91

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/74 (71%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
 Frame = -3

Query: 234 RANYPFLV---IEIHANSD*YLDIDITSFFYPFKQNEMIEVSLFGIVLGLIPITLAGLFV 64
           R NY F     +    N D YL I+ TSFFYP +Q EMIEV LFGIVLGLIPITLAGLFV
Sbjct: 18  RTNYQFFFSWSLRFVDNLDYYLGINRTSFFYPLEQIEMIEVFLFGIVLGLIPITLAGLFV 77

Query: 63  TAYLQYRRGDQLDL 22
           TAYLQYRRGDQLDL
Sbjct: 78  TAYLQYRRGDQLDL 91


>ref|XP_003628180.1| Cytochrome b6/f complex subunit V [Medicago truncatula]
           gi|355522202|gb|AET02656.1| Cytochrome b6/f complex
           subunit V [Medicago truncatula]
          Length = 170

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = -3

Query: 195 NSD*YLDIDITSFFYPFKQNEMIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL 22
           N++ YL IDIT  F+PF Q +MIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLD+
Sbjct: 113 NTNSYLRIDITPTFFPFNQTQMIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDI 170


>ref|XP_003606014.1| Cytochrome b6/f complex subunit V, partial [Medicago truncatula]
           gi|355507069|gb|AES88211.1| Cytochrome b6/f complex
           subunit V, partial [Medicago truncatula]
          Length = 128

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 44/53 (83%), Positives = 47/53 (88%)
 Frame = -3

Query: 195 NSD*YLDIDITSFFYPFKQNEMIEVSLFGIVLGLIPITLAGLFVTAYLQYRRG 37
           N+D YL IDIT  F+PF Q +MIEVSLFGIVLGLIPITLAGLFVTAYLQYRRG
Sbjct: 35  NTDSYLRIDITPTFFPFNQTQMIEVSLFGIVLGLIPITLAGLFVTAYLQYRRG 87


>ref|XP_003605588.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
           gi|355506643|gb|AES87785.1| Photosystem I P700
           chlorophyll a apoprotein [Medicago truncatula]
          Length = 756

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = -3

Query: 195 NSD*YLDIDITSFFYPFKQNEMIEVSLFGIVLGLIPITLAGLFVTAYLQYRR 40
           N+D YL IDIT  F+PF Q +MIEVSLFGIVLGLIPITLAGLFVTAYLQYRR
Sbjct: 35  NTDSYLRIDITPTFFPFNQTQMIEVSLFGIVLGLIPITLAGLFVTAYLQYRR 86


>gb|AFU94573.1| PetG, partial (chloroplast) [Phyllanthus urinaria]
          Length = 37

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = -3

Query: 132 MIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL 22
           MIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL
Sbjct: 1   MIEVSLFGIVLGLIPITLAGLFVTAYLQYRRGDQLDL 37