BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030299
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]    65   7e-09
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    62   3e-08
gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [...    62   3e-08
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    62   5e-08
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    61   8e-08

>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
 Frame = -1

Query: 278 VDGSIICPD------ETHPQYYTWIQCDDIALSWITSTLSRPVLETFLNHDCNSSNEPWN 117
           +DG+  CP+      E +P +  W + D   LSWI S+L+  ++   + H  NSS+  WN
Sbjct: 62  IDGTSXCPEKELRPXEINPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGH--NSSHSAWN 119

Query: 116 ILQQLFLDHASATQMQLRYRFQYFTKGDSMSMSDYMQQ 3
            L+++F   + A  MQLR  FQ   KG SMSM DY+ +
Sbjct: 120 ALEKIFSSCSRARIMQLRLEFQSTKKG-SMSMIDYIMK 156


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 62.0 bits (149), Expect(2) = 3e-08
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
 Frame = -1

Query: 308 FLHGQKVLGVVDGSIICPDET--------------HPQYYTWIQCDDIALSWITSTLSRP 171
           FL GQ +LG V GSI  P +T              +P+YYTW + D +  SW+  +    
Sbjct: 34  FLDGQGLLGFVTGSIPAPSQTSVVSDIDGSTSASPNPEYYTWFKTDRVVKSWLLGSFLED 93

Query: 170 VLETFLNHDCNSSNEPWNILQQLFLDHASATQMQLRYRFQYFTKGDSMSMSDYMQ 6
           +L   +N  CN+S+E W  +   F   +S+   +L+ R Q  +K D  SM +Y++
Sbjct: 94  ILSVVVN--CNTSHEVWISVANHFNRVSSSRLFELQRRLQNVSKRDK-SMDEYLK 145



 Score = 20.8 bits (42), Expect(2) = 3e-08
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 385 STNAKTSVSLELTYDNYRSWK 323
           S N    V++ LT  NY  WK
Sbjct: 8   SLNISNCVTVTLTAKNYILWK 28


>gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17104755|gb|AAL34266.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|51971701|dbj|BAD44515.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|51971723|dbj|BAD44526.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|110741320|dbj|BAF02210.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 405

 Score = 62.0 bits (149), Expect(2) = 3e-08
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
 Frame = -1

Query: 308 FLHGQKVLGVVDGSIICPDET--------------HPQYYTWIQCDDIALSWITSTLSRP 171
           FL GQ +LG V GSI  P +T              +P+YYTW + D +  SW+  +    
Sbjct: 44  FLDGQGLLGFVTGSIPAPSQTSVVSDIDGSTSASPNPEYYTWFKTDRVVKSWLLGSFLED 103

Query: 170 VLETFLNHDCNSSNEPWNILQQLFLDHASATQMQLRYRFQYFTKGDSMSMSDYMQ 6
           +L   +N  CN+S+E W  +   F   +S+   +L+ R Q  +K D  SM +Y++
Sbjct: 104 ILSVVVN--CNTSHEVWISVANHFNRVSSSRLFELQRRLQNVSKRDK-SMDEYLK 155



 Score = 20.8 bits (42), Expect(2) = 3e-08
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 385 STNAKTSVSLELTYDNYRSWK 323
           S N    V++ LT  NY  WK
Sbjct: 18  SLNISNCVTVTLTAKNYILWK 38


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = -1

Query: 278 VDGSIICPDET------HPQYYTWIQCDDIALSWITSTLSRPVLETFLNHDCNSSNEPWN 117
           +DG+ ICP++       +P +  W + D   LSWI S+L+  ++   + H  N+S+  WN
Sbjct: 65  IDGTSICPEKDLSPGVMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGH--NTSHSAWN 122

Query: 116 ILQQLFLDHASATQMQLRYRFQYFTKGDSMSMSDYMQQ 3
            L+ +F   + A  MQLR   Q   KG SMSM DY+ +
Sbjct: 123 ALESIFSSSSRARIMQLRLELQSTKKG-SMSMIDYIMK 159


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
 Frame = -1

Query: 278  VDGSIICPDET------HPQYYTWIQCDDIALSWITSTLSRPVLETFLNHDCNSSNEPWN 117
            +DG  ICPD+       +P +  W + D   LSW+ S+L+  ++   + H  NSS+  WN
Sbjct: 907  IDGFSICPDKELSSGLINPAFVAWRRQDRTILSWLYSSLTPAIMAQIIGH--NSSHSAWN 964

Query: 116  ILQQLFLDHASATQMQLRYRFQYFTKGDSMSMSDYMQQ 3
             L++ F   + A  MQLR   Q   KG S+SM DY+ +
Sbjct: 965  ALEKTFSSSSRARIMQLRLELQSTKKG-SLSMIDYIMK 1001