BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030295
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    54   7e-14
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    48   7e-12
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    53   5e-10
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    45   1e-09
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    52   3e-09

>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 53.5 bits (127), Expect(3) = 7e-14
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -1

Query: 144 FLISTSRSTSIFELLYCVVWGPNKLHSSSGAHYFLTIFYDYSRTV 10
           F +S +++  IFEL+YC +WGP +  S +GA YFLTI  DYSR V
Sbjct: 436 FPLSINKTLRIFELIYCDLWGPYRTPSHTGARYFLTIIDDYSRGV 480



 Score = 36.2 bits (82), Expect(3) = 7e-14
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 376 SLSLIGASERHEGLYYYRTIPTVCTVTVPGLS*FELWHRRFGH 248
           S  ++GA  R  G +++R+     +VTV     +ELWH R GH
Sbjct: 356 SRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMGH 398



 Score = 31.6 bits (70), Expect(3) = 7e-14
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -2

Query: 221 SRSSFSSKQLNKACPVCPQAKQCKDS 144
           S  S SS  LNKAC VC +AKQ ++S
Sbjct: 410 SSVSVSSTHLNKACDVCHRAKQTRNS 435


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 47.8 bits (112), Expect(3) = 7e-12
 Identities = 20/45 (44%), Positives = 32/45 (71%)
 Frame = -1

Query: 144 FLISTSRSTSIFELLYCVVWGPNKLHSSSGAHYFLTIFYDYSRTV 10
           F +S+++++  FEL++C +WGP +  S  G+ YFLT+  DYSR V
Sbjct: 550 FPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVDDYSRAV 594



 Score = 43.1 bits (100), Expect(3) = 7e-12
 Identities = 19/43 (44%), Positives = 25/43 (58%)
 Frame = -3

Query: 376 SLSLIGASERHEGLYYYRTIPTVCTVTVPGLS*FELWHRRFGH 248
           +L LIGA     GLY++R + T   VT   L   +LWH+R GH
Sbjct: 471 TLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGH 513



 Score = 23.5 bits (49), Expect(3) = 7e-12
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 191 NKACPVCPQAKQCKD 147
           +K C +C QAKQ +D
Sbjct: 534 SKTCEICIQAKQTRD 548


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 52.8 bits (125), Expect(2) = 5e-10
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -1

Query: 144 FLISTSRSTSIFELLYCVVWGPNKLHSSSGAHYFLTIFYDYSRTV 10
           F +ST++S   F L++C VWGP ++ SS GA YFLTI  D+SR V
Sbjct: 134 FPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRAV 178



 Score = 35.8 bits (81), Expect(2) = 5e-10
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 376 SLSLIGASERHEGLYYYRTIPTVCTVTVPGLS*FELWHRRFGH 248
           S +LIG+ E  +G+YY   + T    T    S   LWH+R GH
Sbjct: 55  SRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQALWHQRLGH 97


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 45.4 bits (106), Expect(3) = 1e-09
 Identities = 18/45 (40%), Positives = 33/45 (73%)
 Frame = -1

Query: 144 FLISTSRSTSIFELLYCVVWGPNKLHSSSGAHYFLTIFYDYSRTV 10
           F +S ++++S FE+++C +WGP +  S  G++YFLT+  +Y+R V
Sbjct: 514 FPLSNNKTSSPFEMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAV 558



 Score = 38.9 bits (89), Expect(3) = 1e-09
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = -3

Query: 376 SLSLIGASERHEGLYYYRTIPTVCTVTVPGLS*FELWHRRFGH 248
           +L+LIGA ++  GLY++R   TV ++T    S  +LWH R GH
Sbjct: 436 TLTLIGAGKQQNGLYFFRGTETVASMTRMDSS-SQLWHCRLGH 477



 Score = 21.9 bits (45), Expect(3) = 1e-09
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 191 NKACPVCPQAKQCKD 147
           +K C +C +AKQ +D
Sbjct: 498 SKTCEICIKAKQTRD 512


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 51.6 bits (122), Expect(2) = 3e-09
 Identities = 23/42 (54%), Positives = 32/42 (76%)
 Frame = -1

Query: 135 STSRSTSIFELLYCVVWGPNKLHSSSGAHYFLTIFYDYSRTV 10
           S+++ST  F L++C VWGP ++ SS GA YFLTI  D+SR+V
Sbjct: 559 SSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSV 600



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 376 SLSLIGASERHEGLYYYRTIPTVCTVTVPGLS*FELWHRRFGH 248
           S +LIG  E  +G+YY     T     V   +   LWH+R GH
Sbjct: 477 SRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGH 519