BLASTX nr result

ID: Lithospermum22_contig00030283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030283
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis ...   125   4e-27
ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [C...   124   8e-27
ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex...   124   8e-27
ref|NP_849437.1| AP-4 complex subunit mu-1 [Arabidopsis thaliana...   119   2e-25

>ref|XP_002302340.1| predicted protein [Populus trichocarpa] gi|222844066|gb|EEE81613.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/63 (92%), Positives = 63/63 (100%)
 Frame = -2

Query: 190 IISQFFVLSQRGDNIVFRDYRGDIPKGSAEIFFRKVKFWKQDGEEEAPPIFNVDGVNYFH 11
           +ISQFFVLSQRGDNIVFRDYRG++PKGSAEIFFRKVKFWK+DGEEEAPP+FNVDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEEEAPPVFNVDGVNYFH 60

Query: 10  VKV 2
           VKV
Sbjct: 61  VKV 63


>ref|XP_002281307.1| PREDICTED: AP-4 complex subunit mu-1 [Vitis vinifera]
           gi|302142544|emb|CBI19747.3| unnamed protein product
           [Vitis vinifera]
          Length = 451

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/63 (88%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 IISQFFVLSQRGDNIVFRDYRGDIPKGSAEIFFRKVKFWKQDGEEEAPPIFNVDGVNYFH 11
           +ISQFFVLSQRGDNIVFRDYRG++PKGSAEIFFRKVKFWK+DGE +APP+FNVDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 10  VKV 2
           VKV
Sbjct: 61  VKV 63


>ref|XP_004154854.1| PREDICTED: AP-4 complex subunit mu-1-like [Cucumis sativus]
          Length = 451

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 IISQFFVLSQRGDNIVFRDYRGDIPKGSAEIFFRKVKFWKQDGEEEAPPIFNVDGVNYFH 11
           +ISQFFVLSQRGDNIVFRDYRG++PKGSAEIFFRKVKFWK+DGE +APP+FN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 10  VKV 2
           VKV
Sbjct: 61  VKV 63


>ref|XP_004147850.1| PREDICTED: LOW QUALITY PROTEIN: AP-4 complex subunit mu-1-like
           [Cucumis sativus]
          Length = 451

 Score =  124 bits (311), Expect = 8e-27
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 IISQFFVLSQRGDNIVFRDYRGDIPKGSAEIFFRKVKFWKQDGEEEAPPIFNVDGVNYFH 11
           +ISQFFVLSQRGDNIVFRDYRG++PKGSAEIFFRKVKFWK+DGE +APP+FN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 10  VKV 2
           VKV
Sbjct: 61  VKV 63


>ref|NP_849437.1| AP-4 complex subunit mu-1 [Arabidopsis thaliana]
           gi|332659523|gb|AEE84923.1| AP-4 complex subunit mu-1
           [Arabidopsis thaliana]
          Length = 380

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/63 (85%), Positives = 58/63 (92%)
 Frame = -2

Query: 190 IISQFFVLSQRGDNIVFRDYRGDIPKGSAEIFFRKVKFWKQDGEEEAPPIFNVDGVNYFH 11
           +ISQFFVLSQRGDNIVFRDYR ++PKGS E FFRKVKFWK+DG  EAPPIFNVDGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 10  VKV 2
           VKV
Sbjct: 62  VKV 64


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