BLASTX nr result

ID: Lithospermum22_contig00030219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030219
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...    70   2e-10
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    70   2e-10
ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycin...    65   6e-09
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...    61   8e-08

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -1

Query: 286 LEAK*MGSLECLEEKYPIINSEFRQFCASHNILSVEDFLMQDLYALNIVAEQRSNPEKLK 107
           +E + MGSL+ LE +YPII+S+F+ FCASH I SVED L+ DLY L   AEQ+S  E+LK
Sbjct: 48  VELREMGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLK 107


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = -1

Query: 271 MGSLECLEEKYPIINSEFRQFCASHNILSVEDFLMQDLYALNIVAEQRSNPEKLK 107
           MGSL+ LE +YPII+S+F+ FCASH I SVED L+ DLY L   AEQ+S  E+LK
Sbjct: 1   MGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLK 55


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/55 (61%), Positives = 42/55 (76%)
 Frame = -1

Query: 271 MGSLECLEEKYPIINSEFRQFCASHNILSVEDFLMQDLYALNIVAEQRSNPEKLK 107
           MGSL+ LE +YPII+S+F+ FCASH I SVED L+ DLY L   AEQ+S  E+LK
Sbjct: 1   MGSLKSLECEYPIIDSDFQNFCASHGIFSVEDILIHDLYMLVAFAEQQSTSERLK 55


>ref|NP_001242445.1| uncharacterized protein LOC100780427 [Glycine max]
           gi|255635337|gb|ACU18022.1| unknown [Glycine max]
          Length = 325

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = -1

Query: 271 MGSLECLEEKYPIINSEFRQFCASHNILSVEDFLMQDLYALNIVAEQRSNPEKLKL-VSF 95
           M  LE LE++YP+I+S F+ FCASH I SVEDFL+ DL AL    +  S  + LK  +  
Sbjct: 1   MAPLESLEKEYPLIDSNFQSFCASHGIFSVEDFLLHDLDALLSFTDNHSTSQTLKQGIDQ 60

Query: 94  FIGVVNAVAPCLL 56
            I +++A+ P LL
Sbjct: 61  LISIIDALHPPLL 73


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -1

Query: 271 MGSLECLEEKYPIINSEFRQFCASHNILSVEDFLMQDLYALNIVAEQRSNPEKLK 107
           M  L+ LEE  P I+S F  FCASH I +VEDFL++DLY L   AEQ+   EKLK
Sbjct: 1   MAPLKSLEELCPFIDSNFLTFCASHGIFTVEDFLIRDLYVLAAFAEQQPASEKLK 55


Top