BLASTX nr result

ID: Lithospermum22_contig00030185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030185
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vi...    58   9e-07
emb|CBI24861.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_003633574.1| PREDICTED: protein gamma response 1-like [Vitis vinifera]
          Length = 640

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 18/128 (14%)
 Frame = -1

Query: 330 RSIKARDSELHSERKKIREMIIAYKKLKSQYNFLLTK--------VSPTRIRDDAEAKL- 178
           + I+ + SEL SE+KK R+++ AYKKLKSQYNFL +K        ++P +I ++ ++ + 
Sbjct: 346 QQIELKSSELLSEKKKRRDVVAAYKKLKSQYNFLSSKLGLTTENVLTPVKIEEENDSLMH 405

Query: 177 -NQIPITSPVTGNADEQ-------DLLENGKVDASIQQTKSLTPTSNILA-VPEHKGNVK 25
            N IP TS     A++Q       + L++ K    IQ +   +P+S+  A   +   N+ 
Sbjct: 406 HNTIPETSAAACEANKQKNVVSFPENLDSVKRVGLIQSSSCQSPSSSGSAGASKCTTNLN 465

Query: 24  SCPSAGTK 1
           S   AGTK
Sbjct: 466 SSSLAGTK 473


>emb|CBI24861.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
 Frame = -1

Query: 330 RSIKARDSELHSERKKIREMIIAYKKLKSQYNFLLTK--------VSPTRIRDDAEAKLN 175
           + I+ + SEL SE+KK R+++ AYKKLKSQYNFL +K        ++P +I ++ ++ ++
Sbjct: 341 QQIELKSSELLSEKKKRRDVVAAYKKLKSQYNFLSSKLGLTTENVLTPVKIEEENDSLMH 400

Query: 174 QIPITSPVTGNADEQDLLENGKVDASIQQTKSLTPTSNILAVPEHKGNVK 25
            +   +P+     E  + E         + K      N+++ PE+  +VK
Sbjct: 401 HV---NPLNSPGPENTIPETSAAACEANKQK------NVVSFPENLDSVK 441


Top