BLASTX nr result

ID: Lithospermum22_contig00030160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030160
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY57635.1| RAV2 [Solanum lycopersicum]                            122   5e-26
gb|ACT33043.1| RAV transcription factor [Camellia sinensis]           120   2e-25
ref|XP_002315958.1| AP2 domain-containing transcription factor [...   120   2e-25
gb|AAW83473.1| RAV transcription factor [Capsicum annuum]             119   3e-25
gb|ACF74549.1| RAV [Nicotiana tabacum]                                119   3e-25

>gb|ABY57635.1| RAV2 [Solanum lycopersicum]
          Length = 395

 Score =  122 bits (305), Expect = 5e-26
 Identities = 66/145 (45%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
 Frame = -3

Query: 522 EKLFDKVITNSDI-KLCRLALPKLQAKKHFPLHEAEAPEGTLICMQDFVGKTWRFRFTFW 346
           E+LF+KV+T SD+ KL RL +PK  A+KHFPL      +G L+  +D  GK WRFR+++W
Sbjct: 204 EQLFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQNGNNSKGVLLNFEDLNGKVWRFRYSYW 263

Query: 345 KSCQGYVFTSDWNQFVREKGLKAGDVICFLRSTSQNNMQLFVDFKKRPENNKESDVSIQE 166
            S Q YV T  W++FV+EK LKAGD++ F RSTS  + QL++DFK +   N    V+   
Sbjct: 264 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTS-GDKQLYIDFKAKNVGNTSMVVT--- 319

Query: 165 PKDNEDGSQDQ-SVQQPFKLFGVRI 94
              N+  +Q Q  + Q  +LFGV I
Sbjct: 320 ---NQVQAQVQVPLVQMVRLFGVNI 341


>gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
          Length = 362

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = -3

Query: 522 EKLFDKVITNSDI-KLCRLALPKLQAKKHFPLHEAEAPEGTLICMQDFVGKTWRFRFTFW 346
           E+LF+K +T SD+ KL RL +PK  A+KHFPL      +G L+  +D  GK WRFR+++W
Sbjct: 199 EQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSETTSKGVLLNFKDVAGKVWRFRYSYW 258

Query: 345 KSCQGYVFTSDWNQFVREKGLKAGDVICFLRSTSQNNMQLFVDFKKRPENN 193
            S Q YV T  W++FV+EK LKAGD++ F RST  +N QLF+D+K R  +N
Sbjct: 259 NSSQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSDN-QLFIDWKPRNGSN 308


>ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222864998|gb|EEF02129.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 367

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/134 (44%), Positives = 87/134 (64%), Gaps = 3/134 (2%)
 Frame = -3

Query: 564 NLPSHNPERRYPRPEKLFDKVITNSDI-KLCRLALPKLQAKKHFPLHE--AEAPEGTLIC 394
           N   H   R     E+LF+K +T SD+ KL RL +PK  A+KHFPL    + + +G L+ 
Sbjct: 189 NSYDHGCGRVLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLLN 248

Query: 393 MQDFVGKTWRFRFTFWKSCQGYVFTSDWNQFVREKGLKAGDVICFLRSTSQNNMQLFVDF 214
           ++D  GK WRFR+++W S Q YV T  W++FV+EK LKAGD++CF RST  +N QL++D+
Sbjct: 249 LEDVSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVCFQRSTGPDN-QLYIDW 307

Query: 213 KKRPENNKESDVSI 172
           K R  +N+   V +
Sbjct: 308 KARCGSNQVQPVQM 321


>gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
          Length = 399

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
 Frame = -3

Query: 522 EKLFDKVITNSDI-KLCRLALPKLQAKKHFPLHEAEAPEGTLICMQDFVGKTWRFRFTFW 346
           E+LF+K +T SD+ KL RL +PK  A+KHFPL      +G L+  +D  GK WRFR+++W
Sbjct: 210 EQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGNNSKGVLLNFEDLNGKVWRFRYSYW 269

Query: 345 KSCQGYVFTSDWNQFVREKGLKAGDVICFLRSTSQNNMQLFVDFKKR------PENNKES 184
            S Q YV T  W++FV+EK LKAGD++ F RSTS  + QL++DFK R      P    + 
Sbjct: 270 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTS-GDKQLYIDFKARNMAPTNPVVTNQV 328

Query: 183 DVSIQEPKDNEDGSQDQSVQQPFKLFGVRI 94
              +Q P+            Q  +LFGV I
Sbjct: 329 QAQVQVPR-----------VQMMRLFGVNI 347


>gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/149 (42%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
 Frame = -3

Query: 522 EKLFDKVITNSDI-KLCRLALPKLQAKKHFPLHEAEAPEGTLICMQDFVGKTWRFRFTFW 346
           E+LF+K +T SD+ KL RL +PK  A+KHFPL      +G L+  +D  GK WRFR+++W
Sbjct: 195 EQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGNTSKGVLLNFEDLNGKVWRFRYSYW 254

Query: 345 KSCQGYVFTSDWNQFVREKGLKAGDVICFLRSTSQNNMQLFVDFKKRPEN-----NKESD 181
            S Q YV T  W++FV+EK LKAGD++ F RST ++  QL++DFK R           S 
Sbjct: 255 NSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDK-QLYIDFKARNATPTISPTVASQ 313

Query: 180 VSIQEPKDNEDGSQDQSVQQPFKLFGVRI 94
           V +Q P+            Q  +LFGV I
Sbjct: 314 VQVQVPQ-----------VQMVRLFGVNI 331


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