BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030096
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   114   3e-23
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   110   3e-22
ref|XP_003621847.1| Pentatricopeptide repeat-containing protein ...   110   4e-22
ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   104   2e-20

>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  114 bits (284), Expect = 3e-23
 Identities = 54/95 (56%), Positives = 70/95 (73%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           T+NIMINGLCKNG+  N +M+FR+LK+HGFVP L TYNIL++GL K RR   A+ +L E+
Sbjct: 179 TFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKEL 238

Query: 183 GQSGYVPNSITYTTVMKGSLQGWEIPPGIQVTAEM 287
             SGYVPN+ITYTTVMK   +      G+++  EM
Sbjct: 239 ETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEM 273


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  110 bits (275), Expect = 3e-22
 Identities = 53/96 (55%), Positives = 70/96 (72%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           TYNIMINGLCKNGYV N + +FRNL+RHGFVP + TYN L++GL K RR   A+R+L E 
Sbjct: 154 TYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEF 213

Query: 183 GQSGYVPNSITYTTVMKGSLQGWEIPPGIQVTAEMR 290
           G++G  PN++TYTTVM    +      G+++ +EMR
Sbjct: 214 GETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMR 249



 Score = 42.0 bits (97), Expect(2) = 6e-08
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = +1

Query: 238 LCRVGRFRLASKLLLKCVSHGMPILAADKRAILSAYHSSGFKSEIKAFRSKLRV 399
           LCR  RF  ASK+L+ C+  G  +L A +RA++    S G+ +E +  +  +R+
Sbjct: 403 LCRARRFLCASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYANEARKVKLTIRL 456



 Score = 41.2 bits (95), Expect(2) = 6e-08
 Identities = 21/78 (26%), Positives = 39/78 (50%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           +YN +IN  C+ G +D+ + +   ++  G      T+ I++DGL K   +  A+R L  M
Sbjct: 294 SYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYM 353

Query: 183 GQSGYVPNSITYTTVMKG 236
              G+  N + +   + G
Sbjct: 354 NSLGFGSNLVAFNCFLDG 371


>ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496862|gb|AES78065.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 457

 Score =  110 bits (274), Expect = 4e-22
 Identities = 51/96 (53%), Positives = 71/96 (73%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           +YN+MINGLCKNGYV+N +M+FRNL+R GFVP + TYN +++GL K RR   A+R+L E 
Sbjct: 150 SYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEF 209

Query: 183 GQSGYVPNSITYTTVMKGSLQGWEIPPGIQVTAEMR 290
              G+ PN+ITYTTVMK   +   +  G+++ +EMR
Sbjct: 210 CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMR 245


>ref|XP_002308767.1| predicted protein [Populus trichocarpa] gi|222854743|gb|EEE92290.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  108 bits (269), Expect = 2e-21
 Identities = 52/95 (54%), Positives = 68/95 (71%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           TYN M+NGLCK G+V+N +M+FR LKRHGFVP L TYNIL++GL K  +  TA+ +L E+
Sbjct: 149 TYNTMLNGLCKCGFVENALMLFRKLKRHGFVPSLVTYNILINGLCKAWKLKTARWMLKEL 208

Query: 183 GQSGYVPNSITYTTVMKGSLQGWEIPPGIQVTAEM 287
           G SG VPN ITYTTVM+   +      G+++  EM
Sbjct: 209 GASGLVPNVITYTTVMRCCFRSRRFEQGLEIFEEM 243


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  104 bits (260), Expect = 2e-20
 Identities = 51/104 (49%), Positives = 70/104 (67%)
 Frame = +3

Query: 3   TYNIMINGLCKNGYVDNGIMMFRNLKRHGFVPGLDTYNILLDGLYKWRRWGTAKRLLLEM 182
           T+N MINGLCK+GY  N IM+FRNL+RHGF+P L TYNIL++GL K  R   A R+L E 
Sbjct: 149 TFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEA 208

Query: 183 GQSGYVPNSITYTTVMKGSLQGWEIPPGIQVTAEMR*SWHANSG 314
             SG  PN++TYTT+MK   +  +   G ++ ++M+   +A  G
Sbjct: 209 MDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDG 252



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/69 (43%), Positives = 40/69 (57%)
 Frame = +1

Query: 193 DMFLIQSLIRLL*KGLCRVGRFRLASKLLLKCVSHGMPILAADKRAILSAYHSSGFKSEI 372
           D F   SL+      LC+  RFR ASKLL+ C   GM +L A +RA++    SSGF SE 
Sbjct: 387 DSFTYTSLVH----NLCKARRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEA 442

Query: 373 KAFRSKLRV 399
           +  + KLR+
Sbjct: 443 RKLKFKLRL 451