BLASTX nr result

ID: Lithospermum22_contig00030066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030066
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528569.1| PREDICTED: GC-rich sequence DNA-binding fact...    65   6e-09
ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding fact...    62   5e-08
ref|XP_003556701.1| PREDICTED: GC-rich sequence DNA-binding fact...    62   7e-08
ref|XP_003610832.1| GC-rich sequence DNA-binding factor-like pro...    62   9e-08
ref|XP_003530304.1| PREDICTED: GC-rich sequence DNA-binding fact...    60   2e-07

>ref|XP_003528569.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 913

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 21/128 (16%)
 Frame = -3

Query: 382 NKPSSSHPPIKA-----LLSFAD-DEDAEDSPFTRXXXXXXXXXXXXXXXXXK------N 239
           +KP+SS  P K      LLSFAD DE  +++P  R                        +
Sbjct: 33  SKPTSSAKPKKKPQAPKLLSFADEDEQTDENPRPRASKPYRSAATAKKPSSSHKITTLKD 92

Query: 238 RIA----PIKPSNVHPQPGLYTKEALLELQKNTRTL-----AAXXXXXXXXPVIVLKGLV 86
           RIA    P  PSNV PQ G YTKEAL ELQKNTRTL     +         PVIVLKGLV
Sbjct: 93  RIAHSSSPSVPSNVQPQAGTYTKEALRELQKNTRTLVTSSSSRSDPKPSSEPVIVLKGLV 152

Query: 85  KPVNIDPR 62
           KP+  +P+
Sbjct: 153 KPLGSEPQ 160


>ref|XP_004135116.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Cucumis
           sativus]
          Length = 920

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 49/128 (38%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
 Frame = -3

Query: 385 ANKPSSSHPPIKALLSFADDEDAEDSPF----TRXXXXXXXXXXXXXXXXXKNRIAPIK- 221
           A KP  ++P    LLSFA DE+  D+P     ++                  ++I  +K 
Sbjct: 47  ATKPKKANPQGLKLLSFASDEE-NDAPLRPSSSKSSSSKKPSSARLAKPSSTHKITALKD 105

Query: 220 ------------PSNVHPQPGLYTKEALLELQKNTRTLA----AXXXXXXXXPVIVLKGL 89
                       PSNV PQ G+YTKEAL ELQKNTRTLA    +        PVIVLKGL
Sbjct: 106 RIAHSSSISASVPSNVQPQAGVYTKEALRELQKNTRTLASSRPSSESKPSAEPVIVLKGL 165

Query: 88  VKPVNIDP 65
           +KP    P
Sbjct: 166 LKPAEQVP 173


>ref|XP_003556701.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 904

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 54/123 (43%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
 Frame = -3

Query: 382 NKPSSSHPPIKA-----LLSFADDEDAED-------SPFTRXXXXXXXXXXXXXXXXXKN 239
           +KP SS  P K      LLSFADDED  D       S   R                 K+
Sbjct: 34  SKPPSSAKPKKKPQAPKLLSFADDEDETDENPRPRASKPHRTAATAKKPSSSHKITTLKD 93

Query: 238 RIA----PIKPSNVHPQPGLYTKEALLELQKNTRTLAA-----XXXXXXXXPVIVLKGLV 86
           RIA    P  P+NV PQ G YTKEAL ELQKNTRTL +             PVIVLKG V
Sbjct: 94  RIAHTSSPSVPTNVQPQAGTYTKEALRELQKNTRTLVSSSSSRSDPKPSSEPVIVLKGHV 153

Query: 85  KPV 77
           KP+
Sbjct: 154 KPL 156


>ref|XP_003610832.1| GC-rich sequence DNA-binding factor-like protein [Medicago
           truncatula] gi|355512167|gb|AES93790.1| GC-rich sequence
           DNA-binding factor-like protein [Medicago truncatula]
          Length = 892

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 49/129 (37%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
 Frame = -3

Query: 391 NKANKPSSSHPPIKALLSFADDEDAEDSPFTRXXXXXXXXXXXXXXXXXKNRIAPIK--- 221
           +K + P    PP   LLSFADDE   D+   R                  ++I   K   
Sbjct: 27  SKPSAPKPKKPP--KLLSFADDEIDADNETPRPRSSKPHHHRPKPSSSSSHKITTHKNRI 84

Query: 220 --------PSNVHPQPGLYTKEALLELQKNTRTLA---------AXXXXXXXXPVIVLKG 92
                   PSNV PQ G YT EAL ELQKNTRTL          +        PVIVLKG
Sbjct: 85  TSHSPSPSPSNVQPQAGTYTLEALRELQKNTRTLVTPTTASRPISSEPKPSSEPVIVLKG 144

Query: 91  LVKPVNIDP 65
           L+KPV  +P
Sbjct: 145 LLKPVTSEP 153


>ref|XP_003530304.1| PREDICTED: GC-rich sequence DNA-binding factor 1-like [Glycine max]
          Length = 896

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 52/120 (43%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
 Frame = -3

Query: 382 NKPSSSHPPIKA----LLSFADDEDAEDSP--FTRXXXXXXXXXXXXXXXXXKNRIAPIK 221
           +KP SS  P K     LLSFADDE+  +     +                  K+RIA   
Sbjct: 31  SKPPSSAKPKKPQAPKLLSFADDEEISNPRPRSSAKPQRPSKPSSSHKITTLKDRIAHSS 90

Query: 220 P--SNVHPQPGLYTKEALLELQKNTRTLAA-----XXXXXXXXPVIVLKGLVKPVNIDPR 62
              SNV PQ G YTKEAL ELQKNTRTL +             PVIVLKGLVKPV  +P+
Sbjct: 91  SVSSNVQPQAGTYTKEALRELQKNTRTLVSSSTTTTTSSSRSEPVIVLKGLVKPVVSEPQ 150


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