BLASTX nr result
ID: Lithospermum22_contig00030056
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00030056 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223... 177 8e-43 ref|XP_002882790.1| photoperiod-independent early flowering 1 [A... 174 9e-42 ref|XP_002303179.1| chromatin remodeling complex subunit [Populu... 172 3e-41 dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana] 171 4e-41 ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401... 171 4e-41 >ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1| Helicase, putative [Ricinus communis] Length = 2029 Score = 177 bits (449), Expect = 8e-43 Identities = 87/124 (70%), Positives = 103/124 (83%) Frame = -2 Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193 FFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM GID QL+S++CSML+P FS VDL Sbjct: 762 FFGMISIIMQLRKVCNHPDLFEGRPIISSFDMIGIDFQLNSSVCSMLSPGPFSSVDLSGL 821 Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLVHMEKGGLEVKQKSRLHGTNIFEEI 13 G LFTHLDF+MTSWE DE AIATPS LI+ RA++ +E+ G + KQ+ RL GTNIFEEI Sbjct: 822 GLLFTHLDFNMTSWECDEINAIATPSRLIEERANIDSIEEIGPQSKQRKRLPGTNIFEEI 881 Query: 12 QRAL 1 ++AL Sbjct: 882 RKAL 885 >ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] gi|297328630|gb|EFH59049.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp. lyrata] Length = 2057 Score = 174 bits (440), Expect = 9e-42 Identities = 89/125 (71%), Positives = 100/125 (80%), Gaps = 1/125 (0%) Frame = -2 Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193 FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L FSKVDL Sbjct: 805 FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 864 Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16 GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L ME L +K + L GTNIFEE Sbjct: 865 GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDMEAIPLSLKNRKNLQGTNIFEE 924 Query: 15 IQRAL 1 I++A+ Sbjct: 925 IRKAV 929 >ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222840611|gb|EEE78158.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1682 Score = 172 bits (435), Expect = 3e-41 Identities = 83/124 (66%), Positives = 100/124 (80%) Frame = -2 Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193 FFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM G+D+QLSS+ICSM +P +S VDL Sbjct: 401 FFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGVDIQLSSSICSMFSPGPYSSVDLCAL 460 Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLVHMEKGGLEVKQKSRLHGTNIFEEI 13 G +FTHLDF+M SWE DE +AIATPS LI+ RA+L ++E G K RL GTNIFEEI Sbjct: 461 GLIFTHLDFNMVSWECDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEEI 520 Query: 12 QRAL 1 +++L Sbjct: 521 RKSL 524 >dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana] Length = 2061 Score = 171 bits (434), Expect = 4e-41 Identities = 88/125 (70%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Frame = -2 Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193 FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L FSKVDL Sbjct: 811 FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 870 Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16 GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L +E L K + L GTNIFEE Sbjct: 871 GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDLEAIPLSPKNRKNLQGTNIFEE 930 Query: 15 IQRAL 1 I++A+ Sbjct: 931 IRKAV 935 >ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1| photoperiod independent early flowering1 [Arabidopsis thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1 [Arabidopsis thaliana] Length = 2055 Score = 171 bits (434), Expect = 4e-41 Identities = 88/125 (70%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Frame = -2 Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193 FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L FSKVDL Sbjct: 805 FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 864 Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16 GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L +E L K + L GTNIFEE Sbjct: 865 GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDLEAIPLSPKNRKNLQGTNIFEE 924 Query: 15 IQRAL 1 I++A+ Sbjct: 925 IRKAV 929