BLASTX nr result

ID: Lithospermum22_contig00030056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030056
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223...   177   8e-43
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...   174   9e-42
ref|XP_002303179.1| chromatin remodeling complex subunit [Populu...   172   3e-41
dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]          171   4e-41
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...   171   4e-41

>ref|XP_002523405.1| Helicase, putative [Ricinus communis] gi|223537355|gb|EEF38984.1|
            Helicase, putative [Ricinus communis]
          Length = 2029

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/124 (70%), Positives = 103/124 (83%)
 Frame = -2

Query: 372  FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193
            FFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM GID QL+S++CSML+P  FS VDL   
Sbjct: 762  FFGMISIIMQLRKVCNHPDLFEGRPIISSFDMIGIDFQLNSSVCSMLSPGPFSSVDLSGL 821

Query: 192  GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLVHMEKGGLEVKQKSRLHGTNIFEEI 13
            G LFTHLDF+MTSWE DE  AIATPS LI+ RA++  +E+ G + KQ+ RL GTNIFEEI
Sbjct: 822  GLLFTHLDFNMTSWECDEINAIATPSRLIEERANIDSIEEIGPQSKQRKRLPGTNIFEEI 881

Query: 12   QRAL 1
            ++AL
Sbjct: 882  RKAL 885


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata subsp.
            lyrata] gi|297328630|gb|EFH59049.1|
            photoperiod-independent early flowering 1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 2057

 Score =  174 bits (440), Expect = 9e-42
 Identities = 89/125 (71%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = -2

Query: 372  FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193
            FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L    FSKVDL   
Sbjct: 805  FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 864

Query: 192  GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16
            GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L   ME   L +K +  L GTNIFEE
Sbjct: 865  GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDMEAIPLSLKNRKNLQGTNIFEE 924

Query: 15   IQRAL 1
            I++A+
Sbjct: 925  IRKAV 929


>ref|XP_002303179.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222840611|gb|EEE78158.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1682

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/124 (66%), Positives = 100/124 (80%)
 Frame = -2

Query: 372 FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193
           FFGMIS+IMQLRKVCNHPDLFEGRPI+SSFDM G+D+QLSS+ICSM +P  +S VDL   
Sbjct: 401 FFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGVDIQLSSSICSMFSPGPYSSVDLCAL 460

Query: 192 GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLVHMEKGGLEVKQKSRLHGTNIFEEI 13
           G +FTHLDF+M SWE DE +AIATPS LI+ RA+L ++E  G   K   RL GTNIFEEI
Sbjct: 461 GLIFTHLDFNMVSWECDEVKAIATPSRLIEERANLANIEDVGPGSKHLKRLPGTNIFEEI 520

Query: 12  QRAL 1
           +++L
Sbjct: 521 RKSL 524


>dbj|BAB02425.1| helicase-like protein [Arabidopsis thaliana]
          Length = 2061

 Score =  171 bits (434), Expect = 4e-41
 Identities = 88/125 (70%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -2

Query: 372  FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193
            FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L    FSKVDL   
Sbjct: 811  FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 870

Query: 192  GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16
            GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L   +E   L  K +  L GTNIFEE
Sbjct: 871  GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDLEAIPLSPKNRKNLQGTNIFEE 930

Query: 15   IQRAL 1
            I++A+
Sbjct: 931  IRKAV 935


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
            photoperiod independent early flowering1 [Arabidopsis
            thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
            [Arabidopsis thaliana]
          Length = 2055

 Score =  171 bits (434), Expect = 4e-41
 Identities = 88/125 (70%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = -2

Query: 372  FFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMKGIDMQLSSAICSMLTPDLFSKVDLIEY 193
            FFGMIS+IMQLRKVCNHPDLFEGRPIVSSFDM GID+QLSS ICS+L    FSKVDL   
Sbjct: 805  FFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEAL 864

Query: 192  GFLFTHLDFSMTSWESDEAQAIATPSSLIKHRASLV-HMEKGGLEVKQKSRLHGTNIFEE 16
            GFLFTHLDFSMTSWE DE +AI+TPS LIK R +L   +E   L  K +  L GTNIFEE
Sbjct: 865  GFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDLEAIPLSPKNRKNLQGTNIFEE 924

Query: 15   IQRAL 1
            I++A+
Sbjct: 925  IRKAV 929


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