BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030051
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26320.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    97   3e-18
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar...    94   2e-17

>emb|CBI26320.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +1

Query: 238 MKLTSPHSKHPILHLLQQCKTIETIKKVHAQMITTALIHHTYXXXXXXXXXXXXXXXXYA 417
           M+  +P S HP L LL++CKT++T+K+VHA MITT LI HTY                +A
Sbjct: 1   MRGPNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTY-PLSRILLISSTIVFTHA 59

Query: 418 LSIFNQVLNPTIFLFNTLISSLAK-NNHTDSALSLYASIFTETNVEPNNYTYPSLFK 585
           LSIFN + NPTIFL+NTLISSLA    HT  A SLY+ + T T ++PN +T+PSLFK
Sbjct: 60  LSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFK 116


>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +1

Query: 238 MKLTSPHSKHPILHLLQQCKTIETIKKVHAQMITTALIHHTYXXXXXXXXXXXXXXXXYA 417
           M+  +P S HP L LL++CKT++T+K+VHA MITT LI HTY                +A
Sbjct: 1   MRGPNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTY-PLSRILLISSTIVFTHA 59

Query: 418 LSIFNQVLNPTIFLFNTLISSLAK-NNHTDSALSLYASIFTETNVEPNNYTYPSLFK 585
           LSIFN + NPTIFL+NTLISSLA    HT  A SLY+ + T T ++PN +T+PSLFK
Sbjct: 60  LSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFK 116


>ref|XP_003555290.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g43790-like [Glycine max]
          Length = 516

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 53/110 (48%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
 Frame = +1

Query: 265 HPILHLLQQCKTIETIKKVHAQMITTALIHHTYXXXXXXXXXXXXXXXXYALSIFNQVLN 444
           HPIL  LQ+C  + T+K+VHAQM+TT L   TY                YAL+IFN + +
Sbjct: 4   HPILQKLQKCHNLNTLKQVHAQMLTTGLSLQTY-FLSHLLNTSSKFASTYALTIFNHIPS 62

Query: 445 PTIFLFNTLISSLAKNNHTDS---ALSLYASIFTETNVEPNNYTYPSLFK 585
           PT+FL+NTLISSL   +H+D    ALSLY  I T   ++PN++T+PSLFK
Sbjct: 63  PTLFLYNTLISSL--THHSDQIHLALSLYNHILTHNTLQPNSFTFPSLFK 110


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
 Frame = +1

Query: 265 HPILHLLQQCKTIETIKKVHAQMITTALIHHTYXXXXXXXXXXXXXXXXYALSIFNQVLN 444
           HPIL  LQ+C  + T+K+VHAQM+TT L   TY                YA +IFN + N
Sbjct: 6   HPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTY-YLSHLLNTSSKFASTYAFTIFNHIPN 64

Query: 445 PTIFLFNTLISSLAKNNHTDS---ALSLYASIFTETNVEPNNYTYPSLFK 585
           PT+FL+NTLISSL   +H+D    A SLY  I T   ++PN++T+PSLFK
Sbjct: 65  PTLFLYNTLISSL--THHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFK 112


>ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332007627|gb|AED95010.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 460

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
 Frame = +1

Query: 244 LTSPHSK--HPILHLLQQCKTIETIKKVHAQMITTALIHHTYXXXXXXXXXXXXXXXXYA 417
           +TSP +   H  L+L+ +CK+++ +K++HAQ+IT  L HHTY                YA
Sbjct: 1   MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTY-PLSKLLHLSSTVCLSYA 59

Query: 418 LSIFNQVLNPTIFLFNTLISSLAKNNH---TDSALSLYASIFTETN--VEPNNYTYPSLF 582
           LSI  Q+ NP++FL+NTLISS+  N++   T  A SLY  I +  +  V PN +TYPSLF
Sbjct: 60  LSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLF 119

Query: 583 K 585
           K
Sbjct: 120 K 120