BLASTX nr result

ID: Lithospermum22_contig00030046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030046
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   117   2e-24
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]   115   7e-24
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   105   1e-20
ref|XP_002527667.1| ring finger protein, putative [Ricinus commu...   103   4e-20
ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  117 bits (292), Expect = 2e-24
 Identities = 85/215 (39%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
 Frame = -2

Query: 653 KCSHAFHASCIDVWLQSHSNCPLCRANI----------------SFLNYEIIEISPQEQN 522
           KCSHAFH  CID WL+SHSNCPLCRANI                S LN E  + S  E  
Sbjct: 160 KCSHAFHVQCIDTWLKSHSNCPLCRANIVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHE 219

Query: 521 NVVEGFETNTGITGSGEQENVGQTNHPSTGRRSQIDVQDSE---TTVLVK---TQEVRRS 360
           NV  G +       + E+E +     P T  R   D+ +SE   T + ++    Q++RRS
Sbjct: 220 NVAVGEDLE---RVAEEEEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRS 276

Query: 359 VSMDNLFQGRLSIGDILRTTDDDIEDYHIRELQ-KFQAEVGTXXXXXXXXXXXXXXSNMN 183
           +S+D   Q RLS+ DIL   +D  ED  + +   +F   VG+              S+ N
Sbjct: 277 ISLDYSCQTRLSVADILLMNED--EDPQMGDCDCQFPGHVGS---SKVAVGEISKYSHRN 331

Query: 182 KALHHGMSPVRMKRSFSSGRFIFPKRGRGRNTIIP 78
           + LH  MSPV MKRSFSSGR +F +  RGR+ IIP
Sbjct: 332 RVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 366


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score =  115 bits (288), Expect = 7e-24
 Identities = 84/215 (39%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
 Frame = -2

Query: 653  KCSHAFHASCIDVWLQSHSNCPLCRANI----------------SFLNYEIIEISPQEQN 522
            KCSHAFH  CID WL+SHSNCPLCRANI                  LN E  + S  E  
Sbjct: 1162 KCSHAFHVQCIDTWLKSHSNCPLCRANIVPTTVSPTQLPPPVMEXPLNNEPSQQSQLEHE 1221

Query: 521  NVVEGFETNTGITGSGEQENVGQTNHPSTGRRSQIDVQDSE---TTVLVK---TQEVRRS 360
            NV  G +       + E+E +     P T  R   D+ +SE   T + ++    Q++RRS
Sbjct: 1222 NVAVGEDLE---RVAEEEEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRS 1278

Query: 359  VSMDNLFQGRLSIGDILRTTDDDIEDYHIRELQ-KFQAEVGTXXXXXXXXXXXXXXSNMN 183
            +S+D   Q RLS+ DIL   +D  ED  + +   +F   VG+              S+ N
Sbjct: 1279 ISLDYSXQTRLSVADILLMNED--EDPQMGDCDCQFPGHVGS---SKVAVGEISKYSHRN 1333

Query: 182  KALHHGMSPVRMKRSFSSGRFIFPKRGRGRNTIIP 78
            + LH  MSPV MKRSFSSGR +F +  RGR+ IIP
Sbjct: 1334 RVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 1368


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  105 bits (261), Expect = 1e-20
 Identities = 76/214 (35%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
 Frame = -2

Query: 653 KCSHAFHASCIDVWLQSHSNCPLCRANISFLN------------YEIIE--ISPQEQNNV 516
           KCSHAFH  CID WL+SHSNCPLCRANI  +N            Y I    +    Q+N 
Sbjct: 162 KCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPETSQDND 221

Query: 515 VEGFETNTGITGSGEQENVGQTNHPSTG----RRSQIDVQDSETTVLVKTQEVRRSVSMD 348
            E    ++G + S E            G    R + I+++D       + Q++RRS+SMD
Sbjct: 222 YEAVSLDSGQSFSNEDGKNSVRAFSDLGNLEKRDTIIELRDG------RLQQIRRSISMD 275

Query: 347 NLFQGRLSIGDILRTTDDDIEDYHIRELQKFQAEVGTXXXXXXXXXXXXXXSNMNKALHH 168
           +  Q  + I D+LR  +DD     I E        G               S+  + LH 
Sbjct: 276 HCSQNHIIIADVLRLNEDDFGG--IDE----AGSSGDVGSSKHSVGEDSRSSHRKRILHC 329

Query: 167 GMSPVRMKRSFSSGRFIFPKRGRGRNTIIPL*DF 66
            MSPV MKRSFSSGR    K GR    I P+ +F
Sbjct: 330 VMSPVSMKRSFSSGRLSLTKHGREHRGIAPVPNF 363


>ref|XP_002527667.1| ring finger protein, putative [Ricinus communis]
           gi|223532972|gb|EEF34738.1| ring finger protein,
           putative [Ricinus communis]
          Length = 383

 Score =  103 bits (256), Expect = 4e-20
 Identities = 75/221 (33%), Positives = 99/221 (44%), Gaps = 28/221 (12%)
 Frame = -2

Query: 653 KCSHAFHASCIDVWLQSHSNCPLCRANISFLNY--------------------EIIEISP 534
           KCSHAFH SCID WL+SHSNCPLCRANI F++                     E I+ S 
Sbjct: 167 KCSHAFHVSCIDTWLKSHSNCPLCRANIIFISASLPPLPPPPPPLMESLLPGDEPIQGSN 226

Query: 533 QEQNNVVEGFETNTGITGSGEQENVGQTNHPSTGRRSQID---VQDSETTVLVK-----T 378
           +   NV    +       S E E V     P    R   D   +++ +  + ++      
Sbjct: 227 RANANVAVAQDIERERVVSSEDETVQNHGAPKAPLRVFSDLGSLEERDAIIEIRDERYHR 286

Query: 377 QEVRRSVSMDNLFQGRLSIGDILRTTDDDIEDYHIRELQKFQAEVGTXXXXXXXXXXXXX 198
           Q +RRS S+D+  Q R S+ DILR   D  ED  +        + G+             
Sbjct: 287 QHIRRSFSLDHPCQSRASVADILRINQD--EDVILNPENCLSGDAGS--SKHSVEVSKSN 342

Query: 197 XSNMNKALHHGMSPVRMKRSFSSGRFIFPKRGRGRNTIIPL 75
                + L   +SPV MKRSFSSGRF   K GR R+ I P+
Sbjct: 343 SHRRKRVLLGVLSPVTMKRSFSSGRFFLTKHGRVRDFISPV 383


>ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|222840856|gb|EEE78403.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
 Frame = -2

Query: 653 KCSHAFHASCIDVWLQSHSNCPLCRANISFLNYEIIEISPQEQNNVVEGFETNTGITGSG 474
           KCSHAFH  CID WL+SHSNCPLCRANI F +  + ++ P     V E  + N  +  S 
Sbjct: 162 KCSHAFHVPCIDTWLRSHSNCPLCRANIVFFSASLPQLPPP----VTETPQGNESLQESQ 217

Query: 473 E-QENVGQTNHPSTGRRSQIDVQDSETTVLVKTQEVRRSVSMDNLFQGRLSIGDILRTTD 297
              ENV  T    T R ++ +          KT    RS SMD+  Q   SI +I+R   
Sbjct: 218 RANENVSVTQ--DTERVARDEQATQNLAGAPKTPSRVRSFSMDHPCQSHTSIAEIIRMNQ 275

Query: 296 DDIEDYHIRELQKFQAEVGTXXXXXXXXXXXXXXSNMNKALHHGMSPVRMKRSFSSGRFI 117
           D++       ++    +VG+              S+  + L+  ++PV MKRSFSSGRF 
Sbjct: 276 DEVV-----PVEDCSGDVGS--SKHSAEISKCVSSSCRRVLNCVLNPVTMKRSFSSGRFF 328

Query: 116 FPKRGRGRNTI 84
               GR R+TI
Sbjct: 329 LTGHGRMRDTI 339


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