BLASTX nr result

ID: Lithospermum22_contig00030017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030017
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883993.1| kinase family protein [Arabidopsis lyrata su...    70   8e-10
ref|NP_179531.1| U-box domain-containing protein 34 [Arabidopsis...    69   1e-09
ref|XP_004157961.1| PREDICTED: LOW QUALITY PROTEIN: U-box domain...    66   9e-09
ref|XP_004141173.1| PREDICTED: U-box domain-containing protein 3...    66   9e-09
ref|XP_003633112.1| PREDICTED: U-box domain-containing protein 3...    64   3e-08

>ref|XP_002883993.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329833|gb|EFH60252.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 797

 Score = 69.7 bits (169), Expect = 8e-10
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
 Frame = -2

Query: 196 EVNGGDSP--ETTMEAVAVAVK-----RYEGRGSQRAVRWALENLIMKYDKFVLVHVMPT 38
           E++GG  P  E     VAVAVK     +  G GS+RAVRWA++NL+ K D+FV++HV+PT
Sbjct: 8   EMSGGGGPKAEDGQLFVAVAVKGLIGDKLGGAGSRRAVRWAVDNLLPKADRFVMIHVIPT 67

Query: 37  ITSMPTPSGDSI 2
           ITS+PTPS  S+
Sbjct: 68  ITSIPTPSKMSV 79


>ref|NP_179531.1| U-box domain-containing protein 34 [Arabidopsis thaliana]
           gi|75330958|sp|Q8S8S7.1|PUB34_ARATH RecName: Full=U-box
           domain-containing protein 34; AltName: Full=Plant U-box
           protein 34; Includes: RecName: Full=E3 ubiquitin ligase;
           Includes: RecName: Full=Serine/threonine-protein kinase
           gi|20197009|gb|AAM14871.1| putative protein kinase
           [Arabidopsis thaliana] gi|330251784|gb|AEC06878.1| U-box
           domain-containing protein 34 [Arabidopsis thaliana]
          Length = 801

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 7/68 (10%)
 Frame = -2

Query: 196 EVNGGDSP--ETTMEAVAVAVK-----RYEGRGSQRAVRWALENLIMKYDKFVLVHVMPT 38
           E++GG  P  E     VAVAVK     +  G GS+RAVRWA++NL+ K DKFV++HV+PT
Sbjct: 8   EMSGGGGPKAEEGQLFVAVAVKGLIGDKLGGAGSRRAVRWAVDNLLPKADKFVMIHVIPT 67

Query: 37  ITSMPTPS 14
           ITS+PTP+
Sbjct: 68  ITSIPTPN 75


>ref|XP_004157961.1| PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein
           34-like [Cucumis sativus]
          Length = 727

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
 Frame = -2

Query: 163 MEAVAVAVKRYEGR----GSQRAVRWALENLIMKYDKFVLVHVMPTITSMPTPSGDSI 2
           M +VA+AV    G     GS+RAVRWA+ENL+   D+F+LVHVMP ITS+PTP GD +
Sbjct: 1   MTSVAIAVNGVRGGKGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLV 58


>ref|XP_004141173.1| PREDICTED: U-box domain-containing protein 34-like [Cucumis
           sativus]
          Length = 727

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
 Frame = -2

Query: 163 MEAVAVAVKRYEGR----GSQRAVRWALENLIMKYDKFVLVHVMPTITSMPTPSGDSI 2
           M +VA+AV    G     GS+RAVRWA+ENL+   D+F+LVHVMP ITS+PTP GD +
Sbjct: 1   MTSVAIAVNGVRGGKGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLV 58


>ref|XP_003633112.1| PREDICTED: U-box domain-containing protein 34-like [Vitis vinifera]
          Length = 791

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
 Frame = -2

Query: 163 MEAVAVAVKR---YEGRGSQRAVRWALENLIMKYDKFVLVHVMPTITSMPTPSGDSI 2
           M +VAVAV       G GS+RAVRWA+ENL    D  +L+HVMP ITS+PTPSG+ I
Sbjct: 14  MTSVAVAVNGGPGSRGNGSRRAVRWAVENLSADADTLILIHVMPAITSIPTPSGEQI 70


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