BLASTX nr result

ID: Lithospermum22_contig00030003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030003
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002368679.1| voltage gated chloride channel domain-contai...    57   3e-06

>ref|XP_002368679.1| voltage gated chloride channel domain-containing protein
           [Toxoplasma gondii ME49] gi|211966343|gb|EEB01539.1|
           voltage gated chloride channel domain-containing protein
           [Toxoplasma gondii ME49]
          Length = 1779

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 3/185 (1%)
 Frame = +2

Query: 5   PKTIAPSLLPNVPTSMPPSSSDDLPGTSSGSVPISQPSNDQVKSPQNPGNYVVGPQTPEP 184
           P +  PS   +   S PPSSS   P     S P S P +    SP +P      P +P  
Sbjct: 207 PSSSPPSSSTSPSPSSPPSSSPPSPSPPPSSPPSSSPPSSSPPSPSSP-----PPSSPPS 261

Query: 185 IASPSRQSPQKSATMKXXXXXXXXXXXNQNSSIDVPNVPLEPGEHNSSPKSTPYPDISSG 364
            +SPS  SP  S++               +SS    + P  P   +SS   +P    SS 
Sbjct: 262 SSSPSSSSPPPSSS--PPSSSPPSSSSPSSSSPPPSSSPPPPSPPSSSTSPSPSSPPSSS 319

Query: 365 KPVAAPVAGLGNHHLPVN---PSPAYVVAPHPWNDPARAAKPVAAPMHSNHLPPAYHSTT 535
            P  +P         P +   PSP    +P P + P+ ++   ++P  S+  PP    ++
Sbjct: 320 PPSPSPPPSSPPSSSPPSSSPPSPPSPSSPPPSSPPSSSSPSSSSPPPSSSPPPPSPPSS 379

Query: 536 NAPSA 550
           + PS+
Sbjct: 380 SPPSS 384


Top