BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029954
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   395   e-107
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   394   e-107
ref|XP_002889307.1| pentatricopeptide repeat-containing protein ...   388   e-105
ref|NP_178132.1| pentatricopeptide repeat-containing protein [Ar...   387   e-105
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   386   e-105

>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  395 bits (1014), Expect = e-107
 Identities = 187/312 (59%), Positives = 244/312 (78%)
 Frame = +1

Query: 1    FDYIECLLEQQKALPQGRREGFVIRIIMLYGKAGMMRHALNTFFDMHLYGCRRTVKSFNA 180
            FDYIE LLE QK LPQGRREGF+IRIIMLYGKAGM +HA++TF DMH+YGC+RTVKSFNA
Sbjct: 87   FDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNA 146

Query: 181  TLMILTKSRDINMIESFLRDVPMRFEIVIDLMSLNIVVNTFCEMLILDKAYMLMVEAEKS 360
             L +LT++ D+  I++FL +VP +F+I++D+ S+NI++  FC+M ILDKAY++M++ E+ 
Sbjct: 147  ALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERL 206

Query: 361  GLCPDVVTYTTLISAFYKARRWEFANGLWNLMVLKGCPPNLATFNVRIQFLANIGRAWEA 540
            G+ PDVVTYTTLISAFYK  RWE +NGLWNLMVLKGC PNL+TFNVRIQ L NI ++W+A
Sbjct: 207  GIRPDVVTYTTLISAFYKNDRWEISNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQA 266

Query: 541  NELLALMHTAKVIPDEITYNLVIKAFFLARRPDMVERVCSDFYRRGYKPNEKIYQTIIHY 720
            NE++ LM    + PDE+TYNLVIK F  A   +M  RV S  + +GYKPN KIYQT+IH 
Sbjct: 267  NEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHC 326

Query: 721  LCKSGDYDLAFTKCQESMKCNHFPSLHSIHMLLQGLWKNNRRDKAIYIMTLVRKRVPPYK 900
            LCK G++DLA+T C++ MK + F ++ +IH LL GL KN + DKA  I+TL ++R+PP+ 
Sbjct: 327  LCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLLDGLKKNGQLDKAKMIVTLAQRRMPPFS 386

Query: 901  KDQLQAMQSILS 936
              QL    S+LS
Sbjct: 387  SKQLSIFDSLLS 398


>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  394 bits (1011), Expect = e-107
 Identities = 188/312 (60%), Positives = 242/312 (77%)
 Frame = +1

Query: 1    FDYIECLLEQQKALPQGRREGFVIRIIMLYGKAGMMRHALNTFFDMHLYGCRRTVKSFNA 180
            FDYIE LLE QK LPQGRREGF++RIIMLYGKAGM++ A++TF+DMHL+GC+RTVKSFNA
Sbjct: 91   FDYIEHLLEHQKTLPQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNA 150

Query: 181  TLMILTKSRDINMIESFLRDVPMRFEIVIDLMSLNIVVNTFCEMLILDKAYMLMVEAEKS 360
             L +LT+S D+  I+ FLRDVP +F I +D+ S+NIV+   C+M IL+KAYM+M+E EK+
Sbjct: 151  ALKVLTQSYDLEAIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKA 210

Query: 361  GLCPDVVTYTTLISAFYKARRWEFANGLWNLMVLKGCPPNLATFNVRIQFLANIGRAWEA 540
            G+ PDVVTYTTLISAFYK+ RWE  NGLWNLMV+KGC PNLATFNVRIQ+L N  RAW+A
Sbjct: 211  GVNPDVVTYTTLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQA 270

Query: 541  NELLALMHTAKVIPDEITYNLVIKAFFLARRPDMVERVCSDFYRRGYKPNEKIYQTIIHY 720
            N L+ +M    + PDE+TYNLVIK F  A   +M ++V S  + +GYKPN KIYQT+IHY
Sbjct: 271  NSLMGMMEYLGITPDEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHY 330

Query: 721  LCKSGDYDLAFTKCQESMKCNHFPSLHSIHMLLQGLWKNNRRDKAIYIMTLVRKRVPPYK 900
            LCK G++D+A+T C++ M  N   ++ +I+ LL+GL  N   DKA  I+ L RKRVP + 
Sbjct: 331  LCKGGEFDMAYTMCKDCMNRNWSLNVDTIYKLLEGLKGNGEIDKAKVILRLARKRVPSFS 390

Query: 901  KDQLQAMQSILS 936
            K+QL   +S+LS
Sbjct: 391  KNQLGVFESVLS 402


>ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297335148|gb|EFH65566.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 397

 Score =  388 bits (996), Expect = e-105
 Identities = 191/310 (61%), Positives = 238/310 (76%)
 Frame = +1

Query: 4    DYIECLLEQQKALPQGRREGFVIRIIMLYGKAGMMRHALNTFFDMHLYGCRRTVKSFNAT 183
            D+IE LLE QK LPQGRREGF++RIIMLYGKAGM + AL+TF++M LYGC+R+VKSFNA 
Sbjct: 88   DFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFYNMDLYGCKRSVKSFNAA 147

Query: 184  LMILTKSRDINMIESFLRDVPMRFEIVIDLMSLNIVVNTFCEMLILDKAYMLMVEAEKSG 363
            L +L+   D++ I  FL D P ++ I ID +S NI + +FCE+ ILD AYM M E EKSG
Sbjct: 148  LQVLSFKPDLHTIREFLHDAPAKYRIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSG 207

Query: 364  LCPDVVTYTTLISAFYKARRWEFANGLWNLMVLKGCPPNLATFNVRIQFLANIGRAWEAN 543
            L PDVVTYTTLISAFYK  R    NGLWNLMVLKGC PNL TFNVRIQFL N  RAW+AN
Sbjct: 208  LKPDVVTYTTLISAFYKHERCVIGNGLWNLMVLKGCRPNLTTFNVRIQFLVNRRRAWDAN 267

Query: 544  ELLALMHTAKVIPDEITYNLVIKAFFLARRPDMVERVCSDFYRRGYKPNEKIYQTIIHYL 723
            +LL LM   +V PD ITYN+VIK FFLAR P M ERV +  + +GYKPN KIYQT+IHYL
Sbjct: 268  DLLLLMPKLQVEPDSITYNMVIKGFFLARFPHMAERVYTAMHGKGYKPNVKIYQTMIHYL 327

Query: 724  CKSGDYDLAFTKCQESMKCNHFPSLHSIHMLLQGLWKNNRRDKAIYIMTLVRKRVPPYKK 903
            CK+G++DLA+T C++ M+   +P+L ++ MLL+GL K ++ D+A  IM LV KRVPP++ 
Sbjct: 328  CKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKDQLDQAKSIMGLVHKRVPPFRS 387

Query: 904  DQLQAMQSIL 933
             QL +++SIL
Sbjct: 388  KQLLSLKSIL 397


>ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g80150, mitochondrial; Flags: Precursor
            gi|332198242|gb|AEE36363.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 397

 Score =  387 bits (995), Expect = e-105
 Identities = 191/310 (61%), Positives = 238/310 (76%)
 Frame = +1

Query: 4    DYIECLLEQQKALPQGRREGFVIRIIMLYGKAGMMRHALNTFFDMHLYGCRRTVKSFNAT 183
            D+IE LLE QK LPQGRREGF++RIIMLYGKAGM + AL+TFF+M LYGC+R+VKSFNA 
Sbjct: 88   DFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAA 147

Query: 184  LMILTKSRDINMIESFLRDVPMRFEIVIDLMSLNIVVNTFCEMLILDKAYMLMVEAEKSG 363
            L +L+ + D++ I  FL D P ++ I ID +S NI + +FCE+ ILD AYM M E EKSG
Sbjct: 148  LQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSG 207

Query: 364  LCPDVVTYTTLISAFYKARRWEFANGLWNLMVLKGCPPNLATFNVRIQFLANIGRAWEAN 543
            L PDVVTYTTLISA YK  R    NGLWNLMVLKGC PNL TFNVRIQFL N  RAW+AN
Sbjct: 208  LTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAN 267

Query: 544  ELLALMHTAKVIPDEITYNLVIKAFFLARRPDMVERVCSDFYRRGYKPNEKIYQTIIHYL 723
            +LL LM   +V PD ITYN+VIK FFLAR PDM ERV +  + +GYKPN KIYQT+IHYL
Sbjct: 268  DLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYL 327

Query: 724  CKSGDYDLAFTKCQESMKCNHFPSLHSIHMLLQGLWKNNRRDKAIYIMTLVRKRVPPYKK 903
            CK+G++DLA+T C++ M+   +P+L ++ MLL+GL K  + D+A  IM LV +RVPP++ 
Sbjct: 328  CKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRS 387

Query: 904  DQLQAMQSIL 933
             QL +++SIL
Sbjct: 388  KQLLSLKSIL 397


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
            gi|449484169|ref|XP_004156805.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  386 bits (991), Expect = e-105
 Identities = 188/312 (60%), Positives = 240/312 (76%)
 Frame = +1

Query: 1    FDYIECLLEQQKALPQGRREGFVIRIIMLYGKAGMMRHALNTFFDMHLYGCRRTVKSFNA 180
            FDYIE LLE QK LPQGRREGF+IRIIMLYGKA M++HAL+TF+DMHLYGC RTVKSFNA
Sbjct: 86   FDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNA 145

Query: 181  TLMILTKSRDINMIESFLRDVPMRFEIVIDLMSLNIVVNTFCEMLILDKAYMLMVEAEKS 360
             L +L KSRD+  +E+FL + P +F+I +D++S+NI+V  FC+   L++AY+LM+E EK 
Sbjct: 146  VLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKL 205

Query: 361  GLCPDVVTYTTLISAFYKARRWEFANGLWNLMVLKGCPPNLATFNVRIQFLANIGRAWEA 540
            G+ PDVVTYTTLISA YK R+ E +NGLWNLMVL+GC PNL TFNVRIQ L    RAW+A
Sbjct: 206  GIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDA 265

Query: 541  NELLALMHTAKVIPDEITYNLVIKAFFLARRPDMVERVCSDFYRRGYKPNEKIYQTIIHY 720
            N+L+ +M    ++PDE+TYNLVIK F  A   DM +RV S  +  GYKPN KIYQT+IHY
Sbjct: 266  NKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHY 325

Query: 721  LCKSGDYDLAFTKCQESMKCNHFPSLHSIHMLLQGLWKNNRRDKAIYIMTLVRKRVPPYK 900
            LCKS D++LA T C+++M  N FP++ +IH LL+GL K     KA  I+ L RKRVPP+ 
Sbjct: 326  LCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILALARKRVPPFS 385

Query: 901  KDQLQAMQSILS 936
            K+QL+A+ + L+
Sbjct: 386  KNQLEALNTTLA 397