BLASTX nr result

ID: Lithospermum22_contig00029946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029946
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133793.1| PREDICTED: uncharacterized membrane protein ...   150   8e-35
ref|XP_004155189.1| PREDICTED: uncharacterized membrane protein ...   148   5e-34
emb|CBI38686.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_001754351.1| predicted protein [Physcomitrella patens sub...   117   1e-24
ref|NP_178009.1| Ubiquitin-specific protease family C19-related ...   114   8e-24

>ref|XP_004133793.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis
           sativus]
          Length = 305

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
 Frame = +2

Query: 38  LSNATLAAAIEDEQQSRCSCCKPIPALAIYVLISLFLIGLSVSFFLLVAVHNAIFLICFL 217
           +SN +   A  ++     S C PIP+ A+Y+LI LF++G SVS F+LV VHNA F I  L
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 218 CLSALVVAFLLWNLFNSNRKGALLSYLHSLPHTDLTTALHGDLVKLTGLVACGDVSLESA 397
            LS  + AF LWN  N + K A+LS+LHSLP +DLT A  G LVK++G  +CG VSLES+
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLHSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 398 YERVSRCVYTSTLLYEFE-LGLTPANVKRSFFQWRLTYCE 514
           YE+ + CVY ST LYE+  + +    + + +  WRL Y E
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSE 160


>ref|XP_004155189.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis
           sativus]
          Length = 251

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
 Frame = +2

Query: 38  LSNATLAAAIEDEQQSRCSCCKPIPALAIYVLISLFLIGLSVSFFLLVAVHNAIFLICFL 217
           +SN +   A  ++     S C PIP+ A+Y+LI LF++G SVS F+LV VHNA F I  L
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 218 CLSALVVAFLLWNLFNSNRKGALLSYLHSLPHTDLTTALHGDLVKLTGLVACGDVSLESA 397
            LS  + AF LWN  N + K A+LS+L+SLP +DLT A  G LVK++G  +CG VSLES+
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLNSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 398 YERVSRCVYTSTLLYEFE-LGLTPANVKRSFFQWRLTYCE 514
           YE+ + CVY ST LYE+  + +    + + +  WRL Y E
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSE 160


>emb|CBI38686.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
 Frame = +2

Query: 215 LCLSALVVAFLLWNLFNSNRKGALLSYLHSLPHTDLTTALHGDLVKLTGLVACGDVSLES 394
           LC SALV AFL+WN  N  R  AL  YL S P +DL  A HG LVK+TGLV+CG++SLES
Sbjct: 36  LC-SALVAAFLIWNTVNWRRSRALFCYLRSFPDSDLRLARHGQLVKITGLVSCGNISLES 94

Query: 395 AYERVSRCVYTSTLLYEFE-LGLTPANVKRSFFQWRLTYCE 514
           +YE+ +RC+YTSTLLYE+  LGL  A+ K   F W L YCE
Sbjct: 95  SYEKATRCIYTSTLLYEYPGLGLKLADAKVPCFGWGLAYCE 135


>ref|XP_001754351.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694453|gb|EDQ80801.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 511

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
 Frame = +2

Query: 101 KPIPALAIYVLISLFLIGLSVSFFLLVAVHNAIFLICFLCLSALVVAFLLWNLFNSNRKG 280
           K  P + IY LI LF+IG     F+  AV NAI L     L  +VV  L WN F    K 
Sbjct: 241 KNFPRMIIYTLIPLFVIGFIAGAFIFAAVKNAILLFVVAALFGVVVVLLAWNTFWG--KQ 298

Query: 281 ALLSYLHSLPHTDLTTALHGDLVKLTGLVACGDVSLESAYERVSRCVYTSTLLYEF-ELG 457
           A+  +L   PH+DL+TA  G LVK+TG+V CG V LES+Y+RVSRCVYTST LYE+    
Sbjct: 299 AIFGFLAKYPHSDLSTAKDGQLVKITGVVTCGSVPLESSYQRVSRCVYTSTGLYEYRHYS 358

Query: 458 LTPANVKRSFFQWRLTYCE 514
              A+ K   F W L + E
Sbjct: 359 SKKASEKHRRFTWGLRHGE 377


>ref|NP_178009.1| Ubiquitin-specific protease family C19-related protein [Arabidopsis
           thaliana] gi|3834307|gb|AAC83023.1| Strong similarity to
           gene T10I14.120 gi|2832679 putative protein from
           Arabidopsis thaliana BAC gb|AL021712. ESTs gb|N65887 and
           gb|N65627 come from this gene [Arabidopsis thaliana]
           gi|18176178|gb|AAL59998.1| unknown protein [Arabidopsis
           thaliana] gi|20465703|gb|AAM20320.1| unknown protein
           [Arabidopsis thaliana] gi|21539479|gb|AAM53292.1|
           unknown protein [Arabidopsis thaliana]
           gi|23198312|gb|AAN15683.1| unknown protein [Arabidopsis
           thaliana] gi|332198046|gb|AEE36167.1| Ubiquitin-specific
           protease family C19-related protein [Arabidopsis
           thaliana]
          Length = 468

 Score =  114 bits (285), Expect = 8e-24
 Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 1/165 (0%)
 Frame = +2

Query: 23  TVMNNLSNATLAAAIEDEQQSRCSCCKPIPALAIYVLISLFLIGLSVSFFLLVAVHNAIF 202
           +V++N +  TLA   ED+     SC K  P   ++++I +F++G     F+L AVHNAI 
Sbjct: 178 SVVHNQAVTTLAP--EDD----FSCMKSFPKPVLWLVILIFVMGFLAGGFILGAVHNAIL 231

Query: 203 LICFLCLSALVVAFLLWNLFNSNRKGALLSYLHSLPHTDLTTALHGDLVKLTGLVACGDV 382
           LI    L  +V A  +WN+ +  R+G +  ++   P  DL TA +G  VK+TG+V CG+V
Sbjct: 232 LIVVAVLFTVVAALFIWNI-SCERRG-ITDFIARYPDADLRTAKNGQYVKVTGVVTCGNV 289

Query: 383 SLESAYERVSRCVYTSTLLYEFE-LGLTPANVKRSFFQWRLTYCE 514
            LES++ RV RCVYTST LYE+   G  PAN     F W L   E
Sbjct: 290 PLESSFHRVPRCVYTSTCLYEYRGWGSKPANASHRRFTWGLRSAE 334


Top