BLASTX nr result

ID: Lithospermum22_contig00029919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029919
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...   192   4e-47
ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containin...   191   2e-46
ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [...   186   3e-45
dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]           179   4e-43
ref|XP_003544707.1| PREDICTED: zinc finger CCCH domain-containin...   177   1e-42

>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  192 bits (489), Expect = 4e-47
 Identities = 112/238 (47%), Positives = 143/238 (60%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709  GCSRKVCFFAHRPDELRPLHPSTGSAMPSPKSLLANSMDXXXXXXXXXXXXXXXXXXXXX 530
            GC+RKVCFFAH+PDELRP++ STGS MPSP+SL +N+ D                     
Sbjct: 316  GCTRKVCFFAHKPDELRPVYASTGSGMPSPRSLSSNTGDMSTMSPLALGSSSLSLPTTST 375

Query: 529  XXXXXXXXXXXXST-SMWQNLNLNFTPPALQMPGSRLKTTSNARDLDLEMEILGLESIHT 353
                           ++WQN  +N TPPALQ+PGSRLK T +ARDLDLEME+LGLE   +
Sbjct: 376  PPMSPLASVSSPKNGNLWQN-KINLTPPALQLPGSRLKATLSARDLDLEMELLGLEKNVS 434

Query: 352  RMQHRQHLIDEMTSLSSPSSWNNDYNRISDMKPTNLDEVFGSLDPSFASQYQVLSPRVAT 173
            ++QH+Q LIDE++ LSSP  WN D +R +++KP+NLD++FGSLD S  SQ Q  S  + T
Sbjct: 435  QLQHQQQLIDEISRLSSP-YWNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGAS--LKT 491

Query: 172  AAAAQIHSPTARQMHPNMNHLRASY-XXXXXXXXXXXXVKYGFDXXXXXXXXVMNSRS 2
              +AQ+ SPT  QM  NM+ LRASY               +GFD        VMNSRS
Sbjct: 492  PISAQVQSPTGLQMRQNMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRS 549


>ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  191 bits (484), Expect = 2e-46
 Identities = 111/238 (46%), Positives = 143/238 (60%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709  GCSRKVCFFAHRPDELRPLHPSTGSAMPSPKSLLANSMDXXXXXXXXXXXXXXXXXXXXX 530
            GC+RKVCFFAH+PDELRP++ STGS MPSP+SL +N+ D                     
Sbjct: 316  GCTRKVCFFAHKPDELRPVYASTGSGMPSPRSLSSNTGDMSTMSPLALGSSSLSLPTTST 375

Query: 529  XXXXXXXXXXXXST-SMWQNLNLNFTPPALQMPGSRLKTTSNARDLDLEMEILGLESIHT 353
                           ++WQN  +N TPPALQ+PGSRLK T +ARDLDLEME+LGLE   +
Sbjct: 376  PPMSPLASVSSPKNGNLWQN-KINLTPPALQLPGSRLKATLSARDLDLEMELLGLEKNVS 434

Query: 352  RMQHRQHLIDEMTSLSSPSSWNNDYNRISDMKPTNLDEVFGSLDPSFASQYQVLSPRVAT 173
            ++QH+Q LIDE++ LSSP  WN D +R +++KP+NLD++FGSLD S  SQ Q  S  + T
Sbjct: 435  QLQHQQQLIDEISRLSSP-YWNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGAS--LKT 491

Query: 172  AAAAQIHSPTARQMHPNMNHLRASY-XXXXXXXXXXXXVKYGFDXXXXXXXXVMNSRS 2
              +AQ+ SPT  QM  +M+ LRASY               +GFD        VMNSRS
Sbjct: 492  PISAQVQSPTGLQMRQSMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRS 549


>ref|XP_003616654.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355517989|gb|AES99612.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 668

 Score =  186 bits (473), Expect = 3e-45
 Identities = 113/246 (45%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
 Frame = -3

Query: 709  GCSRKVCFFAHRPDELRPLHPSTGSAMPSPKSLLANSMDXXXXXXXXXXXXXXXXXXXXX 530
            GC+RKVCFFAHRP+ELRP++ STGSAMPSPKS  A+ MD                     
Sbjct: 288  GCNRKVCFFAHRPEELRPVYASTGSAMPSPKSYSASGMDMTSMSPLSLSSSSLPMSTVST 347

Query: 529  XXXXXXXXXXXXST-SMWQNLNLNFTPPALQMPGSRLKTTSNARDLDLEMEILGLESIHT 353
                         + +MWQN  LN TPP+LQ+PGSRLK+  +ARDLDLEME+LGL+S   
Sbjct: 348  PPMSPLAGSSSPKSGNMWQN-KLNLTPPSLQLPGSRLKSALSARDLDLEMELLGLDSPRR 406

Query: 352  RMQHRQH--LIDEMTSLSSPSSWNNDYNRISDMKPTNLDEVFGSLDPSFASQYQVLSPRV 179
            + Q +Q   LI+E+  +SSPS  N+++NRI+D+ PTNLD++  S DP+  SQ   LS + 
Sbjct: 407  QQQQQQQQQLIEEIARISSPSFRNSEFNRIADLNPTNLDDLLASADPNLLSQLHGLSMQP 466

Query: 178  ATAAAAQIHSPTARQMH------PNMNHLRASYXXXXXXXXXXXXVK-YGFDXXXXXXXX 20
            +T    Q+HSP+A QM        NMNHLRASY               YGFD        
Sbjct: 467  ST-PTQQMHSPSAMQMRQNMNMGQNMNHLRASYPSNNMPSSPVRKPSPYGFDSSAAVAAA 525

Query: 19   VMNSRS 2
            VMNSRS
Sbjct: 526  VMNSRS 531


>dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]
          Length = 661

 Score =  179 bits (455), Expect = 4e-43
 Identities = 106/238 (44%), Positives = 136/238 (57%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709 GCSRKVCFFAHRPDELRPLHPSTGSAMPSPKSLLANSMDXXXXXXXXXXXXXXXXXXXXX 530
           GC+RKVCFFAH+ +ELRP++ STGSAMPSP+S   ++MD                     
Sbjct: 291 GCTRKVCFFAHKSEELRPVYASTGSAMPSPRSSSVSAMDMVSSSPLAVGSSLPLPTVSTP 350

Query: 529 XXXXXXXXXXXXSTS-MWQNLNLNFTPPALQMPGSRLKTTSNARDLDLEMEILGLESIHT 353
                        +  +WQN   NF+ PALQ+PGSRLKT   ARDLDLEME+LGLE+  +
Sbjct: 351 PMSPLSTGSSSPKSGGLWQN-KTNFSLPALQLPGSRLKTALCARDLDLEMELLGLENQTS 409

Query: 352 RMQHRQH-LIDEMTSLSSPSSWNNDYNRISDMKPTNLDEVFGSLDPSFASQYQVLSPRVA 176
            +Q +Q  L DE++ LSS + W+ND+NRI D+K TN D+VFGSLDPS  S    +S  + 
Sbjct: 410 HLQQQQQQLRDEISGLSSATCWSNDFNRIGDLKSTNFDDVFGSLDPSLMSPLHGMS--LN 467

Query: 175 TAAAAQIHSPTARQMHPNMNHLRASYXXXXXXXXXXXXVKYGFDXXXXXXXXVMNSRS 2
           +A AAQ+ S    Q+  NMN LR+SY              YG D        VMNSRS
Sbjct: 468 SATAAQLQSSNGLQIRQNMNQLRSSYPSSLSSSPVRKPASYGVDSSAAVAAAVMNSRS 525


>ref|XP_003544707.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like isoform
            1 [Glycine max] gi|356552715|ref|XP_003544708.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            29-like isoform 2 [Glycine max]
          Length = 680

 Score =  177 bits (450), Expect = 1e-42
 Identities = 104/238 (43%), Positives = 135/238 (56%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709  GCSRKVCFFAHRPDELRPLHPSTGSAMPSPKSLLANSMDXXXXXXXXXXXXXXXXXXXXX 530
            GC+RKVCFFAH+P+ELRP++ STGSAMPSPKS  A+ +D                     
Sbjct: 315  GCARKVCFFAHKPEELRPVYASTGSAMPSPKSYSASGLDMTAMSPLALSSTSLPMPTVST 374

Query: 529  XXXXXXXXXXXXST-SMWQNLNLNFTPPALQMPGSRLKTTSNARDLDLEMEILGLES-IH 356
                         + SMWQN  +N TPP+LQ+PGSRLK   +ARDL++EME+LGLES   
Sbjct: 375  PPMSPLAAASSPKSGSMWQN-KINLTPPSLQLPGSRLKAALSARDLEMEMELLGLESPAR 433

Query: 355  TRMQHRQHLIDEMTSLSSPSSWNNDYNRISDMKPTNLDEVFGSLDPSFASQYQVLSPRVA 176
             + Q +Q LI+E+  +SSPS  + ++NRI D+ PTNLD++  S DPS  SQ   LS + +
Sbjct: 434  QQQQQQQQLIEEIARISSPSFRSKEFNRIVDLNPTNLDDLLASADPSVFSQLHGLSVQPS 493

Query: 175  TAAAAQIHSPTARQMHPNMNHLRASYXXXXXXXXXXXXVKYGFDXXXXXXXXVMNSRS 2
            T   + +      QM  NMNHLRASY              +GFD        VMNSRS
Sbjct: 494  TPTQSGL------QMRQNMNHLRASYPSNIPSSPVRKPSAFGFDSSAAVATAVMNSRS 545


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