BLASTX nr result

ID: Lithospermum22_contig00029911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029911
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]          129   2e-28
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago trunc...   124   6e-27
ref|XP_002511894.1| zinc finger protein, putative [Ricinus commu...   124   6e-27

>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/101 (58%), Positives = 75/101 (74%)
 Frame = +1

Query: 64  SESPLSAILIRELLPATKFSGMLRSAHGSRDGEQPAQCAVCLYEFRDDEEIRILKNCQHI 243
           S  P+SA LIRE+LP  KF  ++    G+ +G+ P  CAVCLYEF  ++EIR LKNC+HI
Sbjct: 58  SHPPVSATLIREILPVIKFEDLVP---GAGEGDLPESCAVCLYEFDGEDEIRWLKNCKHI 114

Query: 244 FHKNCIDCWMDHDRRTCPLCRKSLVPVDLQDEYNHRLCAAS 366
           FH+ C+D WMDHDR TCPLCR S VP ++Q+E+N RL AAS
Sbjct: 115 FHRACLDRWMDHDRNTCPLCRTSFVPDEMQEEFNQRLLAAS 155


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/117 (53%), Positives = 76/117 (64%)
 Frame = +1

Query: 43  EHHTPESSESPLSAILIRELLPATKFSGMLRSAHGSRDGEQPAQCAVCLYEFRDDEEIRI 222
           ++ T  S    LSA LIRE+LP  KF  +L    G  D   P  CAVCLYEF  ++EIR 
Sbjct: 51  DYPTRTSFYPSLSAALIREILPVIKFEDLLGGDGGCCD--LPESCAVCLYEFEGEDEIRW 108

Query: 223 LKNCQHIFHKNCIDCWMDHDRRTCPLCRKSLVPVDLQDEYNHRLCAASCSDYDLDGE 393
           LKNC+HIFH+ C+D WMDHDR TCPLCR S VP ++Q E+N RL AA+  D D   E
Sbjct: 109 LKNCKHIFHRACLDRWMDHDRNTCPLCRTSFVPDEMQGEFNQRLWAANSDDSDFYDE 165


>ref|XP_002302597.1| predicted protein [Populus trichocarpa] gi|222844323|gb|EEE81870.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/98 (58%), Positives = 72/98 (73%)
 Frame = +1

Query: 73  PLSAILIRELLPATKFSGMLRSAHGSRDGEQPAQCAVCLYEFRDDEEIRILKNCQHIFHK 252
           PLSA L+RE+LP  KF  ++    G  D   P  CAVCLYEF  ++EIR LKNC+HIFH+
Sbjct: 61  PLSAALLREILPVIKFEDLVTGDGGCCD--LPESCAVCLYEFEGEDEIRWLKNCKHIFHR 118

Query: 253 NCIDCWMDHDRRTCPLCRKSLVPVDLQDEYNHRLCAAS 366
            C+D WMDHDR+TCPLCR S VP ++Q+E+N RL AA+
Sbjct: 119 TCLDRWMDHDRKTCPLCRNSFVPDEMQEEFNQRLWAAN 156


>ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago truncatula]
           gi|355497523|gb|AES78726.1| RING-H2 finger protein ATL2C
           [Medicago truncatula]
          Length = 381

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/139 (46%), Positives = 84/139 (60%), Gaps = 8/139 (5%)
 Frame = +1

Query: 1   LDHLGQTESFSHIQEHHT-------PESSESP-LSAILIRELLPATKFSGMLRSAHGSRD 156
           L H      F     HHT       PE  ++P +SA+LIRE LPATK+  +        D
Sbjct: 33  LFHFLGLSDFLETNTHHTGEEATSTPEPCKNPSVSALLIREFLPATKYGELT-------D 85

Query: 157 GEQPAQCAVCLYEFRDDEEIRILKNCQHIFHKNCIDCWMDHDRRTCPLCRKSLVPVDLQD 336
            E+   CAVCL+EF ++EEIR LKNC+HIFH+NC+D W+D D++TCPLCR   VP D+ D
Sbjct: 86  TEEGCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCVDRWIDLDQKTCPLCRTGFVPDDMVD 145

Query: 337 EYNHRLCAASCSDYDLDGE 393
           +YN RL  AS   +   GE
Sbjct: 146 DYNQRLWVASGISWGEGGE 164


>ref|XP_002511894.1| zinc finger protein, putative [Ricinus communis]
           gi|223549074|gb|EEF50563.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 171

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/107 (55%), Positives = 74/107 (69%)
 Frame = +1

Query: 73  PLSAILIRELLPATKFSGMLRSAHGSRDGEQPAQCAVCLYEFRDDEEIRILKNCQHIFHK 252
           P+SA LIRE+LP  K+  ++       D E P  CAVCLYEF  + EIR LKNC+HIFH+
Sbjct: 61  PVSATLIREILPVIKYEDLVAG-----DAELPESCAVCLYEFEREAEIRWLKNCKHIFHR 115

Query: 253 NCIDCWMDHDRRTCPLCRKSLVPVDLQDEYNHRLCAASCSDYDLDGE 393
            C+D WMDHDR TCPLCR S VP ++Q+E+N RL AA+    D DG+
Sbjct: 116 ACLDRWMDHDRNTCPLCRTSFVPDEMQEEFNQRLLAAAA---DNDGD 159


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