BLASTX nr result

ID: Lithospermum22_contig00029901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029901
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD02429.1| pathogenesis-related protein PR2 [Lithospermum er...   116   2e-24
dbj|BAA07505.1| LEDI-1 protein [Lithospermum erythrorhizon] gi|4...   109   2e-22
emb|CAJ29538.1| fra a 1 allergen [Fragaria x ananassa] gi|880824...    72   4e-11
pdb|2LPX|A Chain A, Solution Structure Of Strawberry Allergen Fr...    72   4e-11
emb|CAJ85645.1| Major strawberry allergen Fra a 1-E [Fragaria x ...    72   4e-11

>gb|AAD02429.1| pathogenesis-related protein PR2 [Lithospermum erythrorhizon]
          Length = 154

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/60 (88%), Positives = 57/60 (95%)
 Frame = +3

Query: 48  MGVVEFSETFTSTVPAPKLFKAWFIDSNTLLPKIAPDHVKSVVIEGNGGPGSIKCIHFGD 227
           M VVEF + FTST+PAPKLFKAWFIDSNTLLPKIAPDHVKSVVIEGNGGPGSIKC++FGD
Sbjct: 1   MAVVEFKDVFTSTLPAPKLFKAWFIDSNTLLPKIAPDHVKSVVIEGNGGPGSIKCVNFGD 60


>dbj|BAA07505.1| LEDI-1 protein [Lithospermum erythrorhizon]
           gi|4105484|gb|AAD02428.1| pathogenesis-related protein
           PR1 [Lithospermum erythrorhizon]
          Length = 156

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/60 (80%), Positives = 55/60 (91%)
 Frame = +3

Query: 48  MGVVEFSETFTSTVPAPKLFKAWFIDSNTLLPKIAPDHVKSVVIEGNGGPGSIKCIHFGD 227
           M VV+F++ FTSTVPAPKLFKAWFID +TLLPKIAP+HVK + +EGNGGPGSIKCIHFGD
Sbjct: 1   MAVVDFNDVFTSTVPAPKLFKAWFIDCDTLLPKIAPEHVKKIDVEGNGGPGSIKCIHFGD 60


>emb|CAJ29538.1| fra a 1 allergen [Fragaria x ananassa] gi|88082485|gb|ABD39049.1|
           Fra a 1-A allergen [Fragaria x ananassa]
          Length = 160

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = +3

Query: 48  MGVVEFSETFTSTVPAPKLFKAWFIDSNTLLPKIAPDHVK-SVVIEGNGGPGSIKCIHFG 224
           MGV  +   FTS +PAPKLFKA+ +D++ L+PKIAP  VK + ++EG+GGPG+IK I FG
Sbjct: 1   MGVYTYENEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFG 60

Query: 225 D 227
           +
Sbjct: 61  E 61


>pdb|2LPX|A Chain A, Solution Structure Of Strawberry Allergen Fra A 1e
          Length = 170

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = +3

Query: 48  MGVVEFSETFTSTVPAPKLFKAWFIDSNTLLPKIAPDHVK-SVVIEGNGGPGSIKCIHFG 224
           MGV  +   FTS +PAPKLFKA+ +D++ L+PKIAP  VK + ++EG+GGPG+IK I FG
Sbjct: 1   MGVYTYENEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFG 60

Query: 225 D 227
           +
Sbjct: 61  E 61


>emb|CAJ85645.1| Major strawberry allergen Fra a 1-E [Fragaria x ananassa]
           gi|90185692|emb|CAJ85646.1| Major strawberry allergen
           Fra a 1-E [Fragaria x ananassa]
          Length = 160

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = +3

Query: 48  MGVVEFSETFTSTVPAPKLFKAWFIDSNTLLPKIAPDHVK-SVVIEGNGGPGSIKCIHFG 224
           MGV  +   FTS +PAPKLFKA+ +D++ L+PKIAP  VK + ++EG+GGPG+IK I FG
Sbjct: 1   MGVYTYENEFTSDIPAPKLFKAFVLDADNLIPKIAPQAVKCAEILEGDGGPGTIKKITFG 60

Query: 225 D 227
           +
Sbjct: 61  E 61


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