BLASTX nr result

ID: Lithospermum22_contig00029868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029868
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    63   6e-08
emb|CBI19367.3| unnamed protein product [Vitis vinifera]               63   6e-08
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...    60   7e-07
ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 hom...    57   6e-06
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...    56   1e-05

>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
 Frame = +2

Query: 41   ESRRGKERHSKDGIESERTD---SYNKEESKRSTGRDEDRKNRKR--NSLEDMSADENEK 205
            E  +GKER  KD  ESE  D   SY  +E K+   +D+DRK+RKR  ++++D S+D+ EK
Sbjct: 899  EREKGKERSRKDETESENVDVTGSYGYKEDKKRE-KDKDRKHRKRHQSAVDDASSDKEEK 957

Query: 206  EXXXXXXXXXXXXKKPKQMEQAWTTETDSESQPTIHKKDDVIVSRWTGGTGDGEHIERE 382
            E            KK +  + A+T E+D+ES+   HK++      W G   +G + E E
Sbjct: 958  EESKKSRRHGSDRKKSR--KHAYTPESDTESRHKRHKRE-----HWDGSRRNGGYEELE 1009


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
 Frame = +2

Query: 41   ESRRGKERHSKDGIESERTD---SYNKEESKRSTGRDEDRKNRKR--NSLEDMSADENEK 205
            E  +GKER  KD  ESE  D   SY  +E K+   +D+DRK+RKR  ++++D S+D+ EK
Sbjct: 909  EREKGKERSRKDETESENVDVTGSYGYKEDKKRE-KDKDRKHRKRHQSAVDDASSDKEEK 967

Query: 206  EXXXXXXXXXXXXKKPKQMEQAWTTETDSESQPTIHKKDDVIVSRWTGGTGDGEHIERE 382
            E            KK +  + A+T E+D+ES+   HK++      W G   +G + E E
Sbjct: 968  EESKKSRRHGSDRKKSR--KHAYTPESDTESRHKRHKRE-----HWDGSRRNGGYEELE 1019


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
 Frame = +2

Query: 41   ESRRGKERHSKDGIESER---TDSYNKEESKRSTGRDEDRKNRKRN--SLEDMSADENEK 205
            E  + KER  KD  +SE    TDSY  +E K+   +D+DRK+RKR+    +++S+D++EK
Sbjct: 849  EREKAKERIKKDETDSENVDTTDSYGHKEDKKRE-KDKDRKHRKRHHSGTDEVSSDKDEK 907

Query: 206  EXXXXXXXXXXXXKKPKQMEQAWTTETDSESQPTIHKKDDVIVSRWTGGTGDGE 367
            E            KK +  + ++T E+DSE++   HK+D    SR  G   D E
Sbjct: 908  EESRKSRKHSSDRKKSR--KHSYTPESDSENRHKKHKRDQRESSRKNGDYDDLE 959


>ref|XP_003549369.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max]
          Length = 963

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
 Frame = +2

Query: 41   ESRRGKERHSKDGIESERTDSYN----KEESKRSTGRDEDRKNRKR--NSLEDMSADENE 202
            E  + KERH KD  +S+  D  +    KEE K+   +D++RK+RKR  +S++D+ +++ E
Sbjct: 843  EKDKSKERHRKDETDSDNQDMTDGHGYKEEKKKE--KDKERKHRKRHQSSIDDVDSEKEE 900

Query: 203  KEXXXXXXXXXXXXKKPKQMEQAWTTETDSESQPTIHKKDDVIVSRWTGG 352
            KE            KK +  +QA + E+D+E++   HK++    SR TGG
Sbjct: 901  KEESKKSRRHGSERKKSR--KQADSPESDNENRHRRHKREHWDGSRKTGG 948


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
 Frame = +2

Query: 41   ESRRGKERHSK---DGIESERTDSYNKEESKRSTGRDEDRKNRKR--NSLEDMSADENEK 205
            E  +GK+R  K   DG   + +D Y  ++ K+   +D+DRK+RKR  ++++D+++D++EK
Sbjct: 888  EREKGKQRTKKNETDGENVDASDGYGHKDDKKRE-KDKDRKHRKRHQSAIDDVNSDKDEK 946

Query: 206  EXXXXXXXXXXXXKKPKQMEQAWTTETDSESQPTIHKKDDVIVSRWTGGTGDGE 367
            E            KK +  +  +T E+D ESQ   HK+D    SR  G   + E
Sbjct: 947  EESKKSRKHSSDRKKSR--KHTYTPESDGESQHKRHKRDHRDGSRRNGSNEELE 998


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