BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029806
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519368.1| pentatricopeptide repeat-containing protein,...   142   3e-32
ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ...   138   4e-31
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...   138   4e-31
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ...   135   3e-30

>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  142 bits (358), Expect = 3e-32
 Identities = 62/111 (55%), Positives = 89/111 (80%)
 Frame = -3

Query: 334 IDPSMYPILIKSNGEYGIVFHAHLLKLGLEFDKYIGNVMIGLYGKYGPVEDARRLFDEMS 155
           +D S+YP++IKS+G+ GI+FHAH+LKLG + D YI NV++ +Y K+  +E+AR+LFDEM+
Sbjct: 27  LDASLYPLVIKSSGKDGILFHAHILKLGHQSDPYIRNVILDMYAKHSLIENARKLFDEMT 86

Query: 154 ERSVFDWNVMISGYWNWGNKEEAEKLFDLMMEKNVVTWTTMVTGYARMKDL 2
           ERS+ DWN MI GYW  GN+ EA  LF +  E+NV+TWT MVTG++++K+L
Sbjct: 87  ERSLADWNSMICGYWKCGNETEACSLFSMTPERNVITWTAMVTGFSKIKEL 137



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -3

Query: 259 KLGLEFDKYIGNVMIGLYGKYGPVEDARRLFDEMS-ERSVFDWNVMISGYWNWGNKEEAE 83
           K  ++ + ++   ++ +  K G +E AR +F+E+   R+   WN MIS Y   G+   A 
Sbjct: 215 KRKIKMNYFVKTALLDMNAKCGNLEAARGIFNELGVSRNSSTWNAMISAYTRVGDLLSAR 274

Query: 82  KLFDLMMEKNVVTWTTMVTGYAR 14
            LFD M E++ V+W TM++GYA+
Sbjct: 275 DLFDKMPERDAVSWNTMISGYAQ 297


>ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Glycine max]
          Length = 682

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/126 (53%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
 Frame = -3

Query: 373 ALFCDMQRRYNMMIDPSMYPILIKSNGEYGIVFHAHLLKLGLEFDKYIGNVMIGLYGKYG 194
           +LF  MQ   ++    S YP+LIKS G+ G++ HA+LLKLG   D ++ N ++G+Y KYG
Sbjct: 89  SLFKHMQYYNDIKPYTSFYPVLIKSAGKAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYG 148

Query: 193 PVEDARRLFDEMSERSVFDWNVMISGYWNWGNKEEAEKLFDLM--MEKNVVTWTTMVTGY 20
            +E AR+LFDEM +R+  DWNV+ISGYW  GN++EA +LF +M   EKNV+TWTTMVTG+
Sbjct: 149 CIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGH 208

Query: 19  ARMKDL 2
           A+M++L
Sbjct: 209 AKMRNL 214



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -3

Query: 259 KLGLEFDKYIGNVMIGLYGKYGPVEDARRLFDEMSE-RSVFDWNVMISGYWNWGNKEEAE 83
           ++    + ++   ++ ++ K G +E A+++F+++   ++   WN MIS Y   G+   A 
Sbjct: 292 RMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLAR 351

Query: 82  KLFDLMMEKNVVTWTTMVTGYAR 14
            LF+ M E+N V+W +M+ GYA+
Sbjct: 352 DLFNKMPERNTVSWNSMIAGYAQ 374


>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
           thaliana gb|AC004044.1 and contains two domains PF|01535
           of unknown function [Arabidopsis thaliana]
          Length = 455

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/120 (52%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 DMQRRYNMMIDPSMYPILIKSNGEYGIVFHAHLLKLGLEFDKYIGNVMIGLYGKYGPVED 182
           + + R  +M D   +P++IKS G +GI+F A + KLG   D Y+ NV++ +Y K+  VE 
Sbjct: 10  EQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVES 69

Query: 181 ARRLFDEMSERSVFDWNVMISGYWNWGNKEEAEKLFDLMMEKNVVTWTTMVTGYARMKDL 2
           AR++FD++S+R   DWNVMISGYW WGNKEEA KLFD+M E +VV+WT M+TG+A++KDL
Sbjct: 70  ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDL 129



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -3

Query: 235 YIGNVMIGLYGKYGPVEDARRLFDEM-SERSVFDWNVMISGYWNWGNKEEAEKLFDLMME 59
           ++   ++ ++ K   ++ ARR+F+E+ ++R++  WN MISGY   G+   A +LFD M +
Sbjct: 215 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 274

Query: 58  KNVVTWTTMVTGYA 17
           +NVV+W +++ GYA
Sbjct: 275 RNVVSWNSLIAGYA 288


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/120 (52%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 DMQRRYNMMIDPSMYPILIKSNGEYGIVFHAHLLKLGLEFDKYIGNVMIGLYGKYGPVED 182
           + + R  +M D   +P++IKS G +GI+F A + KLG   D Y+ NV++ +Y K+  VE 
Sbjct: 95  EQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVES 154

Query: 181 ARRLFDEMSERSVFDWNVMISGYWNWGNKEEAEKLFDLMMEKNVVTWTTMVTGYARMKDL 2
           AR++FD++S+R   DWNVMISGYW WGNKEEA KLFD+M E +VV+WT M+TG+A++KDL
Sbjct: 155 ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDL 214



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -3

Query: 235 YIGNVMIGLYGKYGPVEDARRLFDEM-SERSVFDWNVMISGYWNWGNKEEAEKLFDLMME 59
           ++   ++ ++ K   ++ ARR+F+E+ ++R++  WN MISGY   G+   A +LFD M +
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359

Query: 58  KNVVTWTTMVTGYA 17
           +NVV+W +++ GYA
Sbjct: 360 RNVVSWNSLIAGYA 373


>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499041|gb|AES80244.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/128 (50%), Positives = 91/128 (71%), Gaps = 4/128 (3%)
 Frame = -3

Query: 373 ALFCDMQRRYNMMIDPSMYPILIKSNGEYGIVFHAHLLKLGLEFDKYIGNVMIGLYGKYG 194
           +LF  M R  N+  + S Y +++KS G   ++F AH+LK G + D Y+ N ++G+Y KYG
Sbjct: 89  SLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYG 148

Query: 193 PVEDARRLFDEMSERSVFDWNVMISGYWNWGNKEEAEKLFDLM----MEKNVVTWTTMVT 26
           P+E AR+LFDEM +R+V DWNVMISGYW  GN+EEA  LF +M    + +NV+TWTTM+T
Sbjct: 149 PIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMIT 208

Query: 25  GYARMKDL 2
           G+A+  +L
Sbjct: 209 GHAKKGNL 216



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
 Frame = -3

Query: 370 LFCDMQRRYNMMIDPSMYPILIKSNGEYG--IVFHAHLLKL----GLEFDKYIGNVMIGL 209
           LF DM    N+  D + +  +I S    G   +  + + KL    G   + ++   ++ +
Sbjct: 253 LFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDM 312

Query: 208 YGKYGPVEDARRLFDEMSE---RSVFDWNVMISGYWNWGNKEEAEKLFDLMMEKNVVTWT 38
           + K G +E A ++F+++     RS   WN MIS Y   G+   A  LFD M +++ V+W 
Sbjct: 313 HAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWN 372

Query: 37  TMVTGYAR 14
           +M+ GY +
Sbjct: 373 SMIAGYTQ 380



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = -3

Query: 220 MIGLYGKYGPVEDARRLFDEMSERSVFDWNVMISGYWNWGNKEEAEKLF-DLMMEKNV-- 50
           MI  + K G ++ AR  FD+M ERSV  WN M+SGY   G  EE  +LF D++   NV  
Sbjct: 206 MITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQP 265

Query: 49  --VTWTTMVTGYARMKD 5
              TW T+++  + + D
Sbjct: 266 DETTWVTVISSCSSLGD 282