BLASTX nr result

ID: Lithospermum22_contig00029770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029770
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38773.3| unnamed protein product [Vitis vinifera]              173   4e-41
ref|XP_002273381.1| PREDICTED: F-box protein At4g00755-like [Vit...   173   4e-41
ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cuc...   167   2e-39
ref|XP_002320094.1| f-box family protein [Populus trichocarpa] g...   166   5e-39
gb|AFK42252.1| unknown [Lotus japonicus]                              161   2e-37

>emb|CBI38773.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  173 bits (438), Expect = 4e-41
 Identities = 87/159 (54%), Positives = 107/159 (67%), Gaps = 24/159 (15%)
 Frame = +2

Query: 5   IQPFEAFFQQGKPIYSAEFVRFRVGHPNSAS------------------------IKEKE 112
           +QPF+AFFQ G PIY+A+ VRFRVGHP S S                         +  +
Sbjct: 161 VQPFQAFFQPGDPIYAAKSVRFRVGHPKSPSPLDILLQKAIQRNIRTDTSEGFSMAQPVD 220

Query: 113 LVHLPLPLPADDKFVWTYTSQFFPMVQENCLQEFKLPEPILCIGGFLQIELSGRVQRQKS 292
           ++H   P   +D F+WT+TSQ FPM QEN LQ+FKLP+P+LC GG +QIEL GRVQRQ+ 
Sbjct: 221 ILHQEAP---EDGFIWTWTSQEFPMAQENRLQKFKLPKPVLCFGGIVQIELLGRVQRQEM 277

Query: 293 DSLFYICVSHVRVIGHPLFPAFDLEILEPSGNVLLKYYP 409
           D LFYICVSHV VIG  LFP FD+EILEPSG ++LKY+P
Sbjct: 278 DGLFYICVSHVEVIGGRLFPGFDIEILEPSGKIVLKYFP 316


>ref|XP_002273381.1| PREDICTED: F-box protein At4g00755-like [Vitis vinifera]
          Length = 396

 Score =  173 bits (438), Expect = 4e-41
 Identities = 87/159 (54%), Positives = 107/159 (67%), Gaps = 24/159 (15%)
 Frame = +2

Query: 5   IQPFEAFFQQGKPIYSAEFVRFRVGHPNSAS------------------------IKEKE 112
           +QPF+AFFQ G PIY+A+ VRFRVGHP S S                         +  +
Sbjct: 177 VQPFQAFFQPGDPIYAAKSVRFRVGHPKSPSPLDILLQKAIQRNIRTDTSEGFSMAQPVD 236

Query: 113 LVHLPLPLPADDKFVWTYTSQFFPMVQENCLQEFKLPEPILCIGGFLQIELSGRVQRQKS 292
           ++H   P   +D F+WT+TSQ FPM QEN LQ+FKLP+P+LC GG +QIEL GRVQRQ+ 
Sbjct: 237 ILHQEAP---EDGFIWTWTSQEFPMAQENRLQKFKLPKPVLCFGGIVQIELLGRVQRQEM 293

Query: 293 DSLFYICVSHVRVIGHPLFPAFDLEILEPSGNVLLKYYP 409
           D LFYICVSHV VIG  LFP FD+EILEPSG ++LKY+P
Sbjct: 294 DGLFYICVSHVEVIGGRLFPGFDIEILEPSGKIVLKYFP 332


>ref|XP_004133884.1| PREDICTED: F-box protein At4g00755-like [Cucumis sativus]
          Length = 368

 Score =  167 bits (423), Expect = 2e-39
 Identities = 83/132 (62%), Positives = 99/132 (75%)
 Frame = +2

Query: 5   IQPFEAFFQQGKPIYSAEFVRFRVGHPNSASIKEKELVHLPLPLPADDKFVWTYTSQFFP 184
           I+PF+AFFQ G PIYSA+ VRFR GH         +LV       A + F+WTYTS  FP
Sbjct: 178 IRPFQAFFQTGLPIYSAKAVRFRFGHLTHVIDHRSDLVGESHCGSAKETFIWTYTSPEFP 237

Query: 185 MVQENCLQEFKLPEPILCIGGFLQIELSGRVQRQKSDSLFYICVSHVRVIGHPLFPAFDL 364
           M QE+ LQ FKLPEP+LCIGG LQ+EL GRVQRQ++D+LFYICVSHV+VIG PL PAFD+
Sbjct: 238 MAQESYLQRFKLPEPVLCIGGILQVELLGRVQRQETDALFYICVSHVQVIGRPLSPAFDI 297

Query: 365 EILEPSGNVLLK 400
           EILEPS + +LK
Sbjct: 298 EILEPSWDFILK 309


>ref|XP_002320094.1| f-box family protein [Populus trichocarpa]
           gi|222860867|gb|EEE98409.1| f-box family protein
           [Populus trichocarpa]
          Length = 374

 Score =  166 bits (420), Expect = 5e-39
 Identities = 85/142 (59%), Positives = 100/142 (70%)
 Frame = +2

Query: 5   IQPFEAFFQQGKPIYSAEFVRFRVGHPNSASIKEKELVHLPLPLPADDKFVWTYTSQFFP 184
           IQPF+A+FQQG PIYSAE VRF +GHP        + +  PL   ADDKF+WTY+S  FP
Sbjct: 181 IQPFQAYFQQGSPIYSAESVRFHLGHPKCPM---DDTLGEPLDNCADDKFIWTYSSPEFP 237

Query: 185 MVQENCLQEFKLPEPILCIGGFLQIELSGRVQRQKSDSLFYICVSHVRVIGHPLFPAFDL 364
           M QE  LQ FKLPEP++CIGG LQIEL  RVQRQ+ D LFYICV+HV+V G PL  AF +
Sbjct: 238 MAQERSLQNFKLPEPVVCIGGILQIELLRRVQRQEMDGLFYICVAHVQVKGRPLSSAFGV 297

Query: 365 EILEPSGNVLLKYYPEALRQTL 430
           EIL PSG  +LK    A R +L
Sbjct: 298 EILGPSGKFVLKTLSSAPRSSL 319


>gb|AFK42252.1| unknown [Lotus japonicus]
          Length = 304

 Score =  161 bits (407), Expect = 2e-37
 Identities = 82/162 (50%), Positives = 108/162 (66%), Gaps = 5/162 (3%)
 Frame = +2

Query: 5   IQPFEAFFQQGKPIYSAEFVRFRVGHPNSASIKEKELVH--LPLPLPADDKFVWTYTSQF 178
           +QPF+A+FQ G PIYSA+ VRFR+GHP      E  +        +  D +F+WTYTS  
Sbjct: 117 VQPFQAYFQHGFPIYSAKAVRFRMGHPRYPMELESLVADDMAANRMLGDSQFIWTYTSPE 176

Query: 179 FPMVQENCLQEFKLPEPILCIGGFLQIELSGRVQRQKSDSLFYICVSHVRVIGHPLFPAF 358
           FPM QEN LQ+FKLP+P+L IGG L +EL GRVQ+Q+ D LFYIC+SHV+V+G PL PAF
Sbjct: 177 FPMFQENRLQKFKLPDPVLSIGGVLLVELLGRVQKQEMDELFYICISHVQVVGQPLSPAF 236

Query: 359 DLEILEPSGNVLLKYYPE---ALRQTLQKTSDSESNASARVL 475
           D++I  PSG   LKY+P+    +  T   T +S + +  R L
Sbjct: 237 DIKIHHPSGKCTLKYFPQTDWCVPSTSSPTIESNNPSRLRSL 278


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