BLASTX nr result

ID: Lithospermum22_contig00029739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029739
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|3...    55   7e-06
ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatul...    55   7e-06

>ref|XP_003611329.1| Cyclin-like F-box [Medicago truncatula] gi|355512664|gb|AES94287.1|
           Cyclin-like F-box [Medicago truncatula]
          Length = 318

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +3

Query: 84  LVSLMENSINLEDIXXXXXXXXXXXXXAWEEPKNVPTCLSTSLRKISLDGY--SEDELPM 257
           LV L+++   L+D+              W EP+ VP CLS+ LR  SL GY  S  EL  
Sbjct: 212 LVELLQHCPKLQDLTLQKLYERQRDEHDWGEPQTVPKCLSSQLRTCSLIGYKGSNCELLF 271

Query: 258 VEYVLRTAKILEQMDIHSST 317
            EY+L+ AK+L+ M I +S+
Sbjct: 272 AEYILKNAKVLQTMKISTSS 291


>ref|XP_003589973.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355479021|gb|AES60224.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 485

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
 Frame = +3

Query: 24  AQFDNLTTLEIVSTYF------EWRLLVSLMENSINLED-IXXXXXXXXXXXXXAWEEPK 182
           + F NLT LE++  +       +W  ++ L+EN   L+  I              WE+PK
Sbjct: 315 SMFHNLTHLELIFNFMHSSGSLKWSWIMKLLENFPKLQTLIIEEVDIVHNFGDKGWEDPK 374

Query: 183 NVPTCLSTSLRKISLDGYS--EDELPMVEYVLRTAKILEQMDIHSSTCYGDEDEWKAVML 356
            VP CL + L   SL  YS    ELP   Y+++ ++IL  M I S+     +   K  M 
Sbjct: 375 VVPRCLLSHLTTCSLRNYSRINCELPFARYIMQNSRILRTMTIQSAEFL--DTNTKLQMF 432

Query: 357 QKIQKLHRVSENVKFH 404
            ++     + + + FH
Sbjct: 433 MELYLFFPLGDGIPFH 448


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