BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029708
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    96   4e-18
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    96   5e-18
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript...    89   4e-16
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript...    87   2e-15
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    87   2e-15

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
 Frame = -1

Query: 496 VEDVCEWFGYCYFKTFNV----WDSLKVIPVKV*WWKIAWYSGNVSRFSFITWLLCLDRR 329
           V+++ +W        F V    +  L+  PV V W K+ + +    R  FI WL C +R 
Sbjct: 218 VQEMAQWTDLLQTNRFRVNQFYYGLLEPQPV-VSWRKVFFNNEARPRALFILWLACHNRL 276

Query: 328 PTRDRLLKWSMVDDDRCCYCHKRESQHHLFFECHHSARVWRKLLMYFNEYHSPKTWIEKA 149
            T++RL ++ +V+D RC +C + E+  HL FEC     +W+K+L + N  H P  W+++ 
Sbjct: 277 ATKERLYRFGIVNDARCAFCEEVETVQHLLFECGEMYAIWKKVLDWLNVDHEPAGWLQEL 336

Query: 148 RWIEGKGLGESKLRRLCANT---TVYHIWEARNLQIYEQKSVDADQIA 14
            WIE    G++   R    +   TVY  W+ RN +I+E+  VD   IA
Sbjct: 337 DWIEDTSKGKNWKSRFLKTSFVETVYRCWKYRNNKIHEK--VDTADIA 382


>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
 Frame = -1

Query: 499 SVEDVCEWF--GYCYFKTFNVWDSLKVIPVKV*WWKIAWYSGNVSRFSFITWLLCLDRRP 326
           SVED   W    +  F   + W++++    +V W  + W  GN+ + SF  WL   DR  
Sbjct: 93  SVEDRWVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLG 152

Query: 325 TRDRLLKWSMVDDDRCCYCHKR-ESQHHLFFECHHSARVWRKLLMYFNEYHSPKTWIEKA 149
           TR RL +W       C  C    ES+ HLFF CH    +W ++L+  +  H    W  + 
Sbjct: 153 TRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWSRILLLKSSSHRTGYWGVEL 212

Query: 148 RWIEGKGLGES---KLRRLCANTTVYHIWEARNLQIY 47
            WI  +G+G+S   KL RL    T+Y IW+ RN +++
Sbjct: 213 SWIYNQGIGKSVRRKLWRLLWCATIYFIWQERNHRLH 249


>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
 Frame = -1

Query: 508 SLASVEDVCEWFG---YCY-FKTFNVWDSLKVIPVKV*WWKIAWYSGNVSRFSFITWLLC 341
           S A++ED  +W      C  F +   WD+++    ++ W K  W+ G V + +F  W+  
Sbjct: 89  SPATIEDSFDWVVGGVVCQGFSSARTWDAIRPRAPELDWAKAVWFKGAVPKHAFNMWISQ 148

Query: 340 LDRRPTRDRLLKWSMVDDDRCCYCH-KRESQHHLFFECHHSARVWRKLLMYFNEYHSPK- 167
           LDR PTR RL  W  +    CC C  + ES+ HL F C  +A+VWR   + F+    P+ 
Sbjct: 149 LDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSCEFAAQVWR---LAFSRL-CPRQ 204

Query: 166 ----TWIEKARWI-EGKGLGESKLRRLCANTTVYHIWEARN 59
               +W E   W+        S LR++ A+  +Y+IW  RN
Sbjct: 205 RLFCSWAELLSWMRSSSSSAPSLLRKVSAHAIIYNIWRQRN 245


>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 295

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
 Frame = -1

Query: 460 FKTFNVWDSLKVIPVKV*WWKIAWYSGNVSRFSFITWLLCLDRRPTRDRLLKWSMVDDDR 281
           F + + W+ ++V    V W K+ W+   + RFS ITW+  L+R PTRDRL  W M     
Sbjct: 109 FSSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSS 168

Query: 280 CCYCHKRESQH-HLFFECHHSARVWRKLLMYFNEYHSPKTWIEKA-RWIEGKGL--GESK 113
              C   +  H HLFFEC  S  +W      F    SP   +  A  WI    L    + 
Sbjct: 169 WVLCSNGDETHAHLFFECSFSLAIWEFFASKFRP--SPPFGLPAASSWILQLPLRSHSTT 226

Query: 112 LRRLCANTTVYHIWEARNLQIYEQKSVDADQI 17
           + +L   + VYH+W+ RN +I+   S  A  +
Sbjct: 227 ILKLLLQSAVYHVWKERNARIFTSISSSASSL 258


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
 Frame = -1

Query: 535  SILKHCMSCSLASVEDVCEWFGYCY-------FKTFNVWDSLKVI-PVKV*WWKIAWYSG 380
            SIL H  S    S   V + + +C        F     W+ L+   PVK  W K  W+ G
Sbjct: 860  SILSHLASLPPPSPLMVSDSYSWCVDDVDCQGFSAAKTWEVLRPRRPVKR-WAKSVWFKG 918

Query: 379  NVSRFSFITWLLCLDRRPTRDRLLKWSMVDDDRCCYC-HKRESQHHLFFECHHSARVWRK 203
             V + +F  W   L+R PTR RL+ W +V    CC C    E++ HL   C  S++VWR 
Sbjct: 919  AVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRM 978

Query: 202  L-LMYFNEYHSPKTWIEKARWI-EGKGLGESKLRRLCANTTVYHIWEARNLQIYEQKSVD 29
            + L          TW E   W  +      S LR++ A   VY++W  RNL ++    V 
Sbjct: 979  VFLRLCPRQRLLCTWAELLSWTRQSTAAAPSLLRKVVAQLVVYNLWRQRNLVLHSSLRVS 1038

Query: 28   ADQI 17
               +
Sbjct: 1039 CSVV 1042