BLASTX nr result

ID: Lithospermum22_contig00029648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029648
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago trunc...   100   9e-20
ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. l...   100   1e-19
ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...    97   1e-18
gb|AAD28247.1|AF124524_1 gamma-adaptin 1 [Arabidopsis thaliana] ...    94   9e-18
ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like...    94   9e-18

>ref|XP_003613272.1| AP-1 complex subunit gamma-1 [Medicago truncatula]
           gi|355514607|gb|AES96230.1| AP-1 complex subunit gamma-1
           [Medicago truncatula]
          Length = 872

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/59 (81%), Positives = 53/59 (89%)
 Frame = +3

Query: 3   PASSNTLPASGNRSITQKLRVTNSQHGKKSLVLRVRIAYKVNGNDALEERQISNFPRGL 179
           PAS NTLPA+GN S+TQ LRVTNSQHGKKSLV+R+RIAYKVNG D LEE QISNFP+GL
Sbjct: 814 PASGNTLPAAGNGSVTQTLRVTNSQHGKKSLVMRIRIAYKVNGKDTLEEGQISNFPKGL 872


>ref|XP_002890600.1| GAMMA-ADAPTIN 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297336442|gb|EFH66859.1| GAMMA-ADAPTIN 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 876

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/59 (81%), Positives = 53/59 (89%)
 Frame = +3

Query: 3   PASSNTLPASGNRSITQKLRVTNSQHGKKSLVLRVRIAYKVNGNDALEERQISNFPRGL 179
           PASSNTLPASGN +ITQ LRVTNSQHGKKSLV+R+RI YK+NG D LEE Q+SNFPRGL
Sbjct: 818 PASSNTLPASGNGAITQNLRVTNSQHGKKSLVMRMRIGYKLNGKDVLEEGQVSNFPRGL 876


>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
           gi|223539863|gb|EEF41443.1| AP-1 complex subunit
           gamma-2, putative [Ricinus communis]
          Length = 875

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = +3

Query: 3   PASSNTLPASGNRSITQKLRVTNSQHGKKSLVLRVRIAYKVNGNDALEERQISNFPRGL 179
           PASSNTLPASGN S+TQ LRVTNSQHGKK LV+R+RIAYK+NG D LEE QI+NFPR L
Sbjct: 817 PASSNTLPASGNGSLTQNLRVTNSQHGKKPLVMRIRIAYKMNGKDMLEEGQINNFPRDL 875


>gb|AAD28247.1|AF124524_1 gamma-adaptin 1 [Arabidopsis thaliana] gi|3372671|gb|AAC28338.1|
           gamma-adaptin 1 [Arabidopsis thaliana]
          Length = 876

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +3

Query: 3   PASSNTLPASGNRSITQKLRVTNSQHGKKSLVLRVRIAYKVNGNDALEERQISNFPRGL 179
           PA+SNTLPASG+ +ITQ LRVTNSQ GKKSLV+R+RI YK+NG D LEE Q+SNFPRGL
Sbjct: 818 PANSNTLPASGSGAITQNLRVTNSQQGKKSLVMRMRIGYKLNGKDVLEEGQVSNFPRGL 876


>ref|XP_003517779.1| PREDICTED: AP-1 complex subunit gamma-2-like isoform 2 [Glycine max]
          Length = 896

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/59 (76%), Positives = 53/59 (89%)
 Frame = +3

Query: 3    PASSNTLPASGNRSITQKLRVTNSQHGKKSLVLRVRIAYKVNGNDALEERQISNFPRGL 179
            PASSNTLPA+G  SITQ L++TNSQHGKKSLV+R+RIAYK+NG D LEE Q++NFPRGL
Sbjct: 840  PASSNTLPANG--SITQSLKITNSQHGKKSLVMRIRIAYKINGKDTLEEGQVNNFPRGL 896


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