BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029620
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    59   5e-07
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]            59   5e-07
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    58   7e-07
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    58   9e-07
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               57   2e-06

>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = -1

Query: 283 QDPMTMKTLLQSSNFDSLHPIKPIAVLALASHIVSA*SSPHYLWHQRLGHPANSVLNSLV 104
           +DP T + +L+ ++   L+ + P A  ++A+H   A SS   LWH+RLGHP  + + +L 
Sbjct: 443 KDPQTRRVILRCNSHGELYTL-PAAAPSIAAHYNLATSST--LWHRRLGHPGPTAVTTLQ 499

Query: 103 NNKTITCSTSSDPHCNVCQLGKHVKQHF 20
           +   I  S +++  C+ CQLGKH +  F
Sbjct: 500 HLSAIPRSKTNNSLCHACQLGKHTRLPF 527


>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
          Length = 1455

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = -1

Query: 283 QDPMTMKTLLQSSNFDSLHPIKPIAVLALASHIVSA*SSPHYLWHQRLGHPANSVLNSLV 104
           +DP T + +L+ ++   L+ + P A  ++A+H   A SS   LWH+RLGHP  + + +L 
Sbjct: 524 KDPQTRRVILRCNSHGELYTL-PAAAPSIAAHCNLATSST--LWHRRLGHPGPTAVTTLQ 580

Query: 103 NNKTITCSTSSDPHCNVCQLGKHVKQHF 20
           +   I  S +++  C+ CQLGKH +  F
Sbjct: 581 HLSAIPRSKTNNSLCHACQLGKHTRLPF 608


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
 Frame = -1

Query: 283 QDPMTMKTLLQSSNFDSLHPIKPI--AVLALASHIVSA*SSPHYLWHQRLGHPANSVLNS 110
           +D  T +TLL++ +   L+P+ P      A AS  ++  S    +WH+RL HP+N VL +
Sbjct: 376 KDLRTKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSD---IWHRRLPHPSNDVLKT 432

Query: 109 LV-------NNKTITCSTSSDPHCNVCQLGKHVKQHFLSA 11
           L+       N KT+T +      CN CQ+GKHVK  F S+
Sbjct: 433 LISYSYFHPNKKTLTLT------CNACQIGKHVKLPFYSS 466


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/93 (31%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
 Frame = -1

Query: 283 QDPMTMKTLLQSSNFDSLHPIKPIAVLALASHIVSA*SSPHYLWHQRLGHPANSVLNSLV 104
           +D  T   LL+  +   L+ + P +  + + H ++A +S  ++WH+RLGHP++++L+ L+
Sbjct: 455 KDLKTRNKLLRCDSSGPLYSVTPSSYPS-SHHALAATTSDSFIWHRRLGHPSSTLLSHLL 513

Query: 103 NNKTITC-STSSDPHCNVCQLGKHVKQHFLSAN 8
           ++ +I+   T     C  CQLGKH +  F ++N
Sbjct: 514 SSLSISVPKTDLTSLCQACQLGKHTRLPFFNSN 546


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -1

Query: 283 QDPMTMKTLLQSSNFDSLHPIKPIAVLALASHIVSA*SSPHYLWHQRLGHPANSVLNSLV 104
           +D  T   + + ++   L+P  P A  A A       ++P  LWH+RLGH     L+ LV
Sbjct: 557 KDLQTRNVIARCNSSGDLYPFFPPATSATALL-----AAPASLWHRRLGHLGREALSQLV 611

Query: 103 NNKTITCSTSSDPH-CNVCQLGKHVKQHF 20
           ++  I+C+   D H C+ CQLG+H +  F
Sbjct: 612 SSSAISCNKDDDYHLCHACQLGRHTRLPF 640