BLASTX nr result

ID: Lithospermum22_contig00029540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029540
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002322033.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003633196.1| PREDICTED: general transcription factor IIE ...   103   2e-20
ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group] g...   101   7e-20
ref|XP_003573797.1| PREDICTED: general transcription factor IIE ...   100   1e-19

>ref|XP_002331723.1| predicted protein [Populus trichocarpa] gi|222874815|gb|EEF11946.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 17/97 (17%)
 Frame = -3

Query: 240 NRGIAVVVLDALTNKQWVREQDLSKQLQLHAKLLRTTLRFLEQEKFIAVYHRKEPAGEG- 64
           NRGIAVVVLDALT +QWVRE+DL+K+L+LH+K LR TLRF E+EK +   HRKE A    
Sbjct: 36  NRGIAVVVLDALTRRQWVREEDLAKELKLHSKQLRRTLRFFEEEKLVTRDHRKETAKAAK 95

Query: 63  ----------------EGGHKVKMHTYTYYCLDYAQI 1
                           EG  K+KMHT++Y CLDYAQI
Sbjct: 96  MHNAAVANTTDGHRTKEGDDKIKMHTHSYCCLDYAQI 132


>ref|XP_002322033.1| predicted protein [Populus trichocarpa] gi|222869029|gb|EEF06160.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 17/97 (17%)
 Frame = -3

Query: 240 NRGIAVVVLDALTNKQWVREQDLSKQLQLHAKLLRTTLRFLEQEKFIAVYHRKEPAGEG- 64
           NRGIAVVVLDALT +QWVRE+DL+K+L+LH+K LR TLRF E+EK +   HRKE A    
Sbjct: 29  NRGIAVVVLDALTRRQWVREEDLAKELKLHSKQLRRTLRFFEEEKLVTRDHRKETAKAAK 88

Query: 63  ----------------EGGHKVKMHTYTYYCLDYAQI 1
                           EG  K+KMHT++Y CLDYAQI
Sbjct: 89  MHNAAVANTTDGHRTKEGDDKIKMHTHSYCCLDYAQI 125


>ref|XP_003633196.1| PREDICTED: general transcription factor IIE subunit 1-like [Vitis
           vinifera] gi|297735317|emb|CBI17757.3| unnamed protein
           product [Vitis vinifera]
          Length = 475

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/97 (55%), Positives = 67/97 (69%), Gaps = 17/97 (17%)
 Frame = -3

Query: 240 NRGIAVVVLDALTNKQWVREQDLSKQLQLHAKLLRTTLRFLEQEKFIAVYHRKEPA---- 73
           NRGIAVVVLDALT +QWVRE+DL+K L+LH+K LR TLRF E+EK +   HR+E A    
Sbjct: 36  NRGIAVVVLDALTRRQWVREEDLAKDLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAK 95

Query: 72  ---------GEG----EGGHKVKMHTYTYYCLDYAQI 1
                    G+G    EG  K+K+HT++Y CLDYAQI
Sbjct: 96  IYSAAIAATGDGQQTKEGDEKIKLHTHSYCCLDYAQI 132


>ref|NP_001061594.1| Os08g0343300 [Oryza sativa Japonica Group]
           gi|38637014|dbj|BAD03272.1| unknown protein [Oryza
           sativa Japonica Group] gi|113623563|dbj|BAF23508.1|
           Os08g0343300 [Oryza sativa Japonica Group]
           gi|125561187|gb|EAZ06635.1| hypothetical protein
           OsI_28884 [Oryza sativa Indica Group]
           gi|125603072|gb|EAZ42397.1| hypothetical protein
           OsJ_26976 [Oryza sativa Japonica Group]
           gi|215695399|dbj|BAG90590.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 462

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 18/98 (18%)
 Frame = -3

Query: 240 NRGIAVVVLDALTNKQWVREQDLSKQLQLHAKLLRTTLRFLEQEKFIAVYHRKE------ 79
           NRG+AVVVLDALT +QWVRE+DL+K L+LH+K LR  LRF E+EK +   HRKE      
Sbjct: 37  NRGMAVVVLDALTRRQWVREEDLAKALKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAK 96

Query: 78  -------PAGEG-----EGGHKVKMHTYTYYCLDYAQI 1
                   AG+G     EG  KVKMHT++Y CLDYAQI
Sbjct: 97  IYSAAAAAAGDGQSITKEGEEKVKMHTHSYCCLDYAQI 134


>ref|XP_003573797.1| PREDICTED: general transcription factor IIE subunit 1-like
           [Brachypodium distachyon]
          Length = 465

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 18/98 (18%)
 Frame = -3

Query: 240 NRGIAVVVLDALTNKQWVREQDLSKQLQLHAKLLRTTLRFLEQEKFIAVYHRKEPA---- 73
           NRG+AVVVLDALT +QWVRE+DL+K L+LH+K LR  LRF E+EK +   HRKE A    
Sbjct: 37  NRGMAVVVLDALTRRQWVREEDLAKSLKLHSKQLRRILRFFEEEKLVTRDHRKESAKGAK 96

Query: 72  --------------GEGEGGHKVKMHTYTYYCLDYAQI 1
                         G  EG  KVK+HT++Y CLDYAQI
Sbjct: 97  IYSAAAAAAGDGQSGTKEGEEKVKLHTHSYCCLDYAQI 134


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