BLASTX nr result

ID: Lithospermum22_contig00029532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029532
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    47   6e-08
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    44   2e-07
ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|2...    44   2e-07
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    43   2e-06
ref|XP_002333856.1| predicted protein [Populus trichocarpa] gi|2...    40   2e-06

>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 46.6 bits (109), Expect(2) = 6e-08
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +1

Query: 262 RRPLIIRPWELGMSLEMNPMNLLPIWVQFPHLSLDLW 372
           R+P I++PW   MSLE+  +   PIW++ P+L L LW
Sbjct: 103 RKPFILKPWSRDMSLEIEELKSAPIWIKLPNLRLHLW 139



 Score = 35.0 bits (79), Expect(2) = 6e-08
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 77  AVVGYTLGLNPSF------RDMKNYVKVRWNHVGRIEVHWLNSGIFIFNCESEGDRQELI 238
           AVV Y LG + +F      + + N +   W   G ++V+   SG+F+ + ES   ++  +
Sbjct: 34  AVVAYFLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESVHGKELAL 93

Query: 239 EQGP 250
            +GP
Sbjct: 94  GEGP 97


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +1

Query: 265 RPLIIRPWELGMSLEMNPMNLLPIWVQFPHLSLDLW 372
           +P I++PW   +SLE+  +   PIW++ P+L L LW
Sbjct: 104 KPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLW 139



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 77  AVVGYTLGLNPSF------RDMKNYVKVRWNHVGRIEVHWLNSGIFIFNCESEGDRQELI 238
           AVV Y LG + +F      R + N +   W   G ++V+   SG+F+ + ES   ++  +
Sbjct: 34  AVVAYFLGHDSTFGPTSFNRFINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHGKELAL 93

Query: 239 EQGP 250
            +GP
Sbjct: 94  GEGP 97


>ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|222838785|gb|EEE77136.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +1

Query: 265 RPLIIRPWELGMSLEMNPMNLLPIWVQFPHLSLDLW 372
           +P I++PW   +SLE+  +   PIW++ P+L+L LW
Sbjct: 104 KPFILKPWSRDLSLEIKELKSAPIWIKLPNLTLHLW 139



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 77  AVVGYTLGLNPSF------RDMKNYVKVRWNHVGRIEVHWLNSGIFIFNCESEGDRQELI 238
           AVV Y LG + +F      + + N +   W   G ++V+   SG+F+ + ES   ++  +
Sbjct: 34  AVVAYFLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESAHGKELAL 93

Query: 239 EQGP 250
            +GP
Sbjct: 94  GEGP 97


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 43.1 bits (100), Expect(2) = 2e-06
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 265 RPLIIRPWELGMSLEMNPMNLLPIWVQFPHLSLDLW 372
           +P I++PW   +SLE+  +   P+W++ P+L L LW
Sbjct: 104 KPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLW 139



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
 Frame = +2

Query: 77  AVVGYTLGLNPSF------RDMKNYVKVRWNHVGRIEVHWLNSGIFIFNCESEGDRQELI 238
           AVV Y LG + +F      R + + +   W   G ++V+   SG+F+ + ES   +   +
Sbjct: 34  AVVAYFLGHDSTFGPTSFNRFINSLIDSEWRKYGNVKVYSQGSGVFVLDFESAHGKVLAL 93

Query: 239 EQGP 250
            +GP
Sbjct: 94  GEGP 97


>ref|XP_002333856.1| predicted protein [Populus trichocarpa] gi|222838783|gb|EEE77134.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 265 RPLIIRPWELGMSLEMNPMNLLPIWVQFPHLS 360
           +P I++PW   MSLE+  +   PIW++ P+LS
Sbjct: 104 KPFILKPWSRDMSLEIEELKSAPIWIRLPNLS 135



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 77  AVVGYTLGLNPSF------RDMKNYVKVRWNHVGRIEVHWLNSGIFIFNCESEGDRQELI 238
           AVV Y LG + +F      R + N +   W   G ++V+   SG+F+ + ES   ++  +
Sbjct: 34  AVVAYFLGHDSTFGPPSFNRFINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHGKELAL 93

Query: 239 EQGP 250
            +GP
Sbjct: 94  GEGP 97


Top