BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029524
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   196   1e-48
emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicoti...   196   1e-48
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   195   3e-48
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   192   2e-47
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              184   9e-45

>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/160 (64%), Positives = 124/160 (77%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   VRIHNLLEQTXXXXXXXADGIILEEDQSSEDA----QDKEKLKRTVTNLMKKQKLRAVNQ 170
           VRIHN LE+T             E+D+  ED     Q++EKL++ VTNLMKKQKLRAV Q
Sbjct: 305 VRIHNFLEKTKKQKA--------EKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 356

Query: 171 ILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQ-QADQTHDGSPDIRPAFVHTVKTLIK 347
           I++R+DDSKPWG +AKAKVGSRLIELLLQTAYIQ  A+Q     PDIRPAF+H+V+T+ K
Sbjct: 357 IVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAK 416

Query: 348 ESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPP 467
           E+K ASRRYG+IQCD  + KGLE+TARHMVIPYMPML+PP
Sbjct: 417 ETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPP 456


>emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicotiana tabacum]
          Length = 562

 Score =  196 bits (499), Expect = 1e-48
 Identities = 103/160 (64%), Positives = 124/160 (77%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   VRIHNLLEQTXXXXXXXADGIILEEDQSSEDA----QDKEKLKRTVTNLMKKQKLRAVNQ 170
           VRIHN LE+T             E+D+  ED     Q++EKL++ VTNLMKKQKLRAV Q
Sbjct: 1   VRIHNFLEKTKKQKA--------EKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 52

Query: 171 ILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQ-QADQTHDGSPDIRPAFVHTVKTLIK 347
           I++R+DDSKPWG +AKAKVGSRLIELLLQTAYIQ  A+Q     PDIRPAF+H+V+T+ K
Sbjct: 53  IVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAK 112

Query: 348 ESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPP 467
           E+K ASRRYG+IQCD  + KGLE+TARHMVIPYMPML+PP
Sbjct: 113 ETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPP 152


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  195 bits (496), Expect = 3e-48
 Identities = 102/160 (63%), Positives = 124/160 (77%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   VRIHNLLEQTXXXXXXXADGIILEEDQSSEDA----QDKEKLKRTVTNLMKKQKLRAVNQ 170
           VRIHN LE+T             E+D+  ED     Q++EKL++ VTNLMKKQKLRAV Q
Sbjct: 304 VRIHNFLEKTKKQKA--------EKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 355

Query: 171 ILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIK 347
           I++R+DDSKPWG +A+AKVGSRLI+LLLQTAYIQ  A+Q     PDIRPAFVH+V+T+ K
Sbjct: 356 IVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAK 415

Query: 348 ESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPP 467
           E+K ASRRYG+IQCD  + KGLE+TARHMVIPYMPML+PP
Sbjct: 416 ETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPP 455


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score =  192 bits (489), Expect = 2e-47
 Identities = 101/160 (63%), Positives = 123/160 (76%), Gaps = 5/160 (3%)
 Frame = +3

Query: 3   VRIHNLLEQTXXXXXXXADGIILEEDQSSEDA----QDKEKLKRTVTNLMKKQKLRAVNQ 170
           VRIHN LE+T             E+D+  ED     Q++EKL++ VTNLMKKQKLRAV Q
Sbjct: 304 VRIHNFLEKTKKQKA--------EKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQ 355

Query: 171 ILKRRDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIK 347
           I++R+DDSKPWG +A+AKVGSRLI+LLLQTAYIQ  A+Q     PDI PAFVH+V+T+ K
Sbjct: 356 IVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAK 415

Query: 348 ESKFASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPP 467
           E+K ASRRYG+IQCD  + KGLE+TARHMVIPYMPML+PP
Sbjct: 416 ETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPP 455


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  184 bits (466), Expect = 9e-45
 Identities = 94/156 (60%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
 Frame = +3

Query: 3   VRIHNLLEQTXXXXXXXADGIILEEDQSSEDAQDKEKLKRTVTNLMKKQKLRAVNQILKR 182
           VRI   +E+T        +     +  S+   +++EKL++ V+ LMKKQKL+ V QI+KR
Sbjct: 94  VRIQRFMEKTKKKSASSNN----PDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKR 149

Query: 183 RDDSKPWGAEAKAKVGSRLIELLLQTAYIQQ-ADQTHDGSPDIRPAFVHTVKTLIKESKF 359
           +DDSKPWG +A  KVGSRLIELL++TAYIQ  ADQ  DG PDIRPAFVHT+KT+IKE++ 
Sbjct: 150 QDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQK 209

Query: 360 ASRRYGVIQCDPQILKGLEKTARHMVIPYMPMLIPP 467
            +RRYGVI+CDP + KGLEKTARHMVIPYMPML+PP
Sbjct: 210 GTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPP 245