BLASTX nr result

ID: Lithospermum22_contig00029520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029520
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ72500.1| MADS-box protein 15 [Petunia x hybrida]                100   2e-19
gb|ADU56823.1| MADS-box protein FLC subfamily [Coffea arabica] g...    97   1e-18
gb|ACZ26524.1| flowering locus C [Vitis vinifera]                      96   2e-18
ref|XP_002276141.1| PREDICTED: MADS-box transcription factor 18 ...    96   2e-18
gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x ...    94   9e-18

>gb|AAQ72500.1| MADS-box protein 15 [Petunia x hybrida]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/94 (54%), Positives = 74/94 (78%)
 Frame = +3

Query: 6   IESKSSRQVTFTKRRNGLMKKANQLAILCDVEVAVIIFSDRGKLYHFAGPNNSLSETVQR 185
           I+ K+SRQVTF+KRR GL+KKA +L+ILCD +VAV++FS+RG+LY F+  NNSL+E VQR
Sbjct: 11  IQDKNSRQVTFSKRRKGLIKKAKELSILCDADVAVVVFSNRGRLYDFSS-NNSLTEIVQR 69

Query: 186 FTSYAEKEEDSSISACGSEKDHRKFGAIMSIREL 287
           + S+ E E++  ISA  S+ +  K+ +IM+I E+
Sbjct: 70  YHSHVEAEKE--ISAEASDAEQSKYASIMTIGEM 101


>gb|ADU56823.1| MADS-box protein FLC subfamily [Coffea arabica]
           gi|339830664|gb|AEK20759.1| FLOWERING LOCUS C [Coffea
           arabica]
          Length = 206

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/95 (54%), Positives = 72/95 (75%)
 Frame = +3

Query: 3   RIESKSSRQVTFTKRRNGLMKKANQLAILCDVEVAVIIFSDRGKLYHFAGPNNSLSETVQ 182
           +IE K+SRQVTF+KRR+GLMKKA +L++LCDV+VAV+IFS RGKLY F    NSL++ +Q
Sbjct: 10  KIEDKNSRQVTFSKRRSGLMKKAKELSVLCDVDVAVLIFSGRGKLYDFCS-TNSLAKILQ 68

Query: 183 RFTSYAEKEEDSSISACGSEKDHRKFGAIMSIREL 287
           R+ +YAE  ED S    G EK + +   +++IR+L
Sbjct: 69  RYRNYAE-AEDGSARISGVEKRNPEGRNVVTIRKL 102


>gb|ACZ26524.1| flowering locus C [Vitis vinifera]
          Length = 210

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   RIESKSSRQVTFTKRRNGLMKKANQLAILCDVEVAVIIFSDRGKLYHFAGPNNSLSETVQ 182
           RIE KSSRQVTF+KRRNGL+KKA +L++LCDV+VAV++FS RGKLY +A   NSL+  ++
Sbjct: 10  RIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYEYAN-GNSLARILE 68

Query: 183 RFTSYAEKEEDSSISACGSEKDHRKF 260
           R+ S+ E E ++S  A  SE  H ++
Sbjct: 69  RYQSHFEAEGNASTGANESENCHYEY 94


>ref|XP_002276141.1| PREDICTED: MADS-box transcription factor 18 [Vitis vinifera]
          Length = 210

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/86 (55%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   RIESKSSRQVTFTKRRNGLMKKANQLAILCDVEVAVIIFSDRGKLYHFAGPNNSLSETVQ 182
           RIE KSSRQVTF+KRRNGL+KKA +L++LCDV+VAV++FS RGKLY +A   NSL+  ++
Sbjct: 10  RIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYEYAN-GNSLARILE 68

Query: 183 RFTSYAEKEEDSSISACGSEKDHRKF 260
           R+ S+ E E ++S  A  SE  H ++
Sbjct: 69  RYQSHFEAEGNASTGANESENCHYEY 94


>gb|AEG19540.1| flowering locus C-like protein [Vitis labrusca x Vitis vinifera]
          Length = 210

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/86 (55%), Positives = 65/86 (75%)
 Frame = +3

Query: 3   RIESKSSRQVTFTKRRNGLMKKANQLAILCDVEVAVIIFSDRGKLYHFAGPNNSLSETVQ 182
           RIE KSSRQVTF+KRRNGL+KKA +L++LCDV+VAV++FS RGKLY  A   NSL+  ++
Sbjct: 10  RIEDKSSRQVTFSKRRNGLIKKARELSVLCDVDVAVLVFSSRGKLYECAN-GNSLTRILE 68

Query: 183 RFTSYAEKEEDSSISACGSEKDHRKF 260
           R+ S+ E E ++S  A  SE  H ++
Sbjct: 69  RYQSHFEAEGNASTGANESENCHYEY 94


Top