BLASTX nr result

ID: Lithospermum22_contig00029500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029500
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28180.3| unnamed protein product [Vitis vinifera]              338   8e-91
ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   338   8e-91
ref|XP_002524471.1| dead box ATP-dependent RNA helicase, putativ...   323   4e-86
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   322   6e-86
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   320   2e-85

>emb|CBI28180.3| unnamed protein product [Vitis vinifera]
          Length = 916

 Score =  338 bits (868), Expect = 8e-91
 Identities = 172/257 (66%), Positives = 203/257 (78%)
 Frame = +1

Query: 145  VEATGSNIPRAVESFGEMNFPSGLSENISKCGYVKPTPIQKYAIPVAMVGRDLMACAQTG 324
            VEA+GS+IP  V +F E++   GL++NI +C YVKPTPIQ++AIP+AM GRDLMACAQTG
Sbjct: 409  VEASGSDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTG 468

Query: 325  SGKTAAFCFPIISLILKERLATQXXXXXXXXXXILCPTRELSCQIHEEATKFSRXXXXXX 504
            SGKTAAFCFPII  IL+ +L+            IL PTRELSCQIHEEA KFS       
Sbjct: 469  SGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKV 528

Query: 505  XXXXXXXXXXXXXRNLEKGVDILVATPGRLVDMIERSKVSLRNIKYLALDEADRMLDMGF 684
                         RNLE+GVDILVATPGRLVDMIER++VSLR IKYLALDEADRMLDMGF
Sbjct: 529  VVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGF 588

Query: 685  EPQIRRIVEQMEMPVPGVRQTLLFSATFPDEIQRLSSDFLKDYIFLTAGKVGSSTDLIVQ 864
            EPQIR+IVEQM+MP PG RQT+LFSATFP+EIQRL++DFL +YIFL+ G+VGSSTDLIVQ
Sbjct: 589  EPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQ 648

Query: 865  KIDFVHDTEKRSHLMNL 915
            +++FV DT+KR HLM+L
Sbjct: 649  RVEFVEDTDKRYHLMDL 665


>ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 615

 Score =  338 bits (868), Expect = 8e-91
 Identities = 172/257 (66%), Positives = 203/257 (78%)
 Frame = +1

Query: 145 VEATGSNIPRAVESFGEMNFPSGLSENISKCGYVKPTPIQKYAIPVAMVGRDLMACAQTG 324
           VEA+GS+IP  V +F E++   GL++NI +C YVKPTPIQ++AIP+AM GRDLMACAQTG
Sbjct: 121 VEASGSDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTG 180

Query: 325 SGKTAAFCFPIISLILKERLATQXXXXXXXXXXILCPTRELSCQIHEEATKFSRXXXXXX 504
           SGKTAAFCFPII  IL+ +L+            IL PTRELSCQIHEEA KFS       
Sbjct: 181 SGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKV 240

Query: 505 XXXXXXXXXXXXXRNLEKGVDILVATPGRLVDMIERSKVSLRNIKYLALDEADRMLDMGF 684
                        RNLE+GVDILVATPGRLVDMIER++VSLR IKYLALDEADRMLDMGF
Sbjct: 241 VVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGF 300

Query: 685 EPQIRRIVEQMEMPVPGVRQTLLFSATFPDEIQRLSSDFLKDYIFLTAGKVGSSTDLIVQ 864
           EPQIR+IVEQM+MP PG RQT+LFSATFP+EIQRL++DFL +YIFL+ G+VGSSTDLIVQ
Sbjct: 301 EPQIRKIVEQMDMPPPGARQTMLFSATFPNEIQRLAADFLSNYIFLSVGRVGSSTDLIVQ 360

Query: 865 KIDFVHDTEKRSHLMNL 915
           +++FV DT+KR HLM+L
Sbjct: 361 RVEFVEDTDKRYHLMDL 377


>ref|XP_002524471.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536259|gb|EEF37911.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 604

 Score =  323 bits (827), Expect = 4e-86
 Identities = 168/264 (63%), Positives = 196/264 (74%), Gaps = 7/264 (2%)
 Frame = +1

Query: 145 VEATGSNIPRAVESFGEMNFPSGLSENISKCGYVKPTPIQKYAIPVAMVGRDLMACAQTG 324
           V+ +GS++P+  ++F E++   GL+ENI +C YVKPTPIQKYA+P+A+ GRDLMACAQTG
Sbjct: 127 VKVSGSDVPKPAKAFSEIDLGKGLNENIRRCKYVKPTPIQKYALPIALSGRDLMACAQTG 186

Query: 325 SGKTAAFCFPIISLILKERL-------ATQXXXXXXXXXXILCPTRELSCQIHEEATKFS 483
           SGKTAAFCFPIISLILK+                      IL PTRELSCQIHEEA KF+
Sbjct: 187 SGKTAAFCFPIISLILKQNQPIVGSGRGDGGTHTASPSALILSPTRELSCQIHEEAQKFA 246

Query: 484 RXXXXXXXXXXXXXXXXXXXRNLEKGVDILVATPGRLVDMIERSKVSLRNIKYLALDEAD 663
                               RNLEKGVDILVATPGRLVDMIER +VSL  +KYLALDEAD
Sbjct: 247 YNTGVKIVVAYGGAPIVHQFRNLEKGVDILVATPGRLVDMIERGRVSLGMVKYLALDEAD 306

Query: 664 RMLDMGFEPQIRRIVEQMEMPVPGVRQTLLFSATFPDEIQRLSSDFLKDYIFLTAGKVGS 843
           RMLDMGFEPQIR+IV+QM+MP PG RQT+LFSATFP EIQRL+SDFL DYIFLT G+VGS
Sbjct: 307 RMLDMGFEPQIRKIVQQMDMPPPGERQTMLFSATFPLEIQRLASDFLSDYIFLTVGRVGS 366

Query: 844 STDLIVQKIDFVHDTEKRSHLMNL 915
           STDLI Q+++ V D +KRS LM L
Sbjct: 367 STDLIAQRVELVQDMDKRSRLMVL 390


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  322 bits (826), Expect = 6e-86
 Identities = 161/260 (61%), Positives = 201/260 (77%), Gaps = 3/260 (1%)
 Frame = +1

Query: 145 VEATGSNIPRAVESFGEMNFPSGLSENISKCGYVKPTPIQKYAIPVAMVGRDLMACAQTG 324
           VE +G N+P  V +F E++    L++NI +C YVKPTP+Q++AIP+++ GRDLMACAQTG
Sbjct: 141 VETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTPVQRHAIPISLAGRDLMACAQTG 200

Query: 325 SGKTAAFCFPIISLILKERLATQXXXXXXXXXX---ILCPTRELSCQIHEEATKFSRXXX 495
           SGKTAAFCFPIIS I+K + + +             IL PTRELSCQIH+EA KFS    
Sbjct: 201 SGKTAAFCFPIISGIMKGQASQRPPRGARTVYPLALILSPTRELSCQIHDEAKKFSYQTG 260

Query: 496 XXXXXXXXXXXXXXXXRNLEKGVDILVATPGRLVDMIERSKVSLRNIKYLALDEADRMLD 675
                           R+LE+GVDILVATPGRLVD++ER++VSL+ I+YLALDEADRMLD
Sbjct: 261 VKVVVAYGGAPISQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 320

Query: 676 MGFEPQIRRIVEQMEMPVPGVRQTLLFSATFPDEIQRLSSDFLKDYIFLTAGKVGSSTDL 855
           MGFEPQIR+IVEQM+MP  GVRQT+LFSATFP EIQ+L+SDFL +Y+FL  G+VGSSTDL
Sbjct: 321 MGFEPQIRKIVEQMDMPPQGVRQTMLFSATFPKEIQKLASDFLSNYVFLAVGRVGSSTDL 380

Query: 856 IVQKIDFVHDTEKRSHLMNL 915
           IVQ+++FVHDT+KRSHLM+L
Sbjct: 381 IVQRVEFVHDTDKRSHLMDL 400


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score =  320 bits (821), Expect = 2e-85
 Identities = 161/259 (62%), Positives = 199/259 (76%), Gaps = 2/259 (0%)
 Frame = +1

Query: 145 VEATGSNIPRAVESFGEMNFPSGLSENISKCGYVKPTPIQKYAIPVAMVGRDLMACAQTG 324
           VE +G N+P  V +F E++    L++NI +C YVKPTP+Q++AIP+++ G+DLMACAQTG
Sbjct: 151 VETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLSGKDLMACAQTG 210

Query: 325 SGKTAAFCFPIISLILKERLATQXXXXXXXXXX--ILCPTRELSCQIHEEATKFSRXXXX 498
           SGKTAAFCFPIIS I+  + A +            IL PTRELSCQIH+EA KFS     
Sbjct: 211 SGKTAAFCFPIISGIMTGQFAQRPRGARTVYPLALILSPTRELSCQIHDEARKFSYQTGV 270

Query: 499 XXXXXXXXXXXXXXXRNLEKGVDILVATPGRLVDMIERSKVSLRNIKYLALDEADRMLDM 678
                          R LE+GVDILVATPGRLVD++ER++VSL+ I+YLALDEADRMLDM
Sbjct: 271 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 330

Query: 679 GFEPQIRRIVEQMEMPVPGVRQTLLFSATFPDEIQRLSSDFLKDYIFLTAGKVGSSTDLI 858
           GFEPQIR+IVEQM+MP PGVRQT+LFSATFP EIQRL+SDFL  YIFL  G+VGSSTDLI
Sbjct: 331 GFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVGSSTDLI 390

Query: 859 VQKIDFVHDTEKRSHLMNL 915
           VQ+++FVH+++KRSHLM+L
Sbjct: 391 VQRVEFVHESDKRSHLMDL 409


Top