BLASTX nr result
ID: Lithospermum22_contig00029475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00029475
(2212 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi... 676 0.0
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera] 669 0.0
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,... 661 0.0
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2... 657 0.0
ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containi... 628 e-177
>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product
[Vitis vinifera]
Length = 525
Score = 676 bits (1743), Expect = 0.0
Identities = 321/493 (65%), Positives = 405/493 (82%)
Frame = +3
Query: 171 SNDADSISQIVLHHHNPFHSMESSLQLNGISLNATLVHQILLRLQHASKVALAFFEYTQK 350
S DAD IS+I+L HHNPFH+MESSLQLNGI+L+ LVHQ LLRL++ SK+AL+FF + K
Sbjct: 50 SYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWA-K 108
Query: 351 CHPGYKHDSTSFNIVIDILCRVRQFDVAWQLIVQMDQQYQAHKMVNHPHAAFKPNFTTFY 530
+ HD S+N++IDIL +VRQFDVAWQ I++MDQ + +P TTF
Sbjct: 109 DQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQN------------SLEPTSTTFR 156
Query: 531 ILLRRLISAGLTRQAIRAFDEMHIFIEEESDVVWKSYFCYLLDTLCKYGYVKVATEVFNK 710
IL+RR +SAGLTRQA+RAFD+M F+E+++D FCYLLDTL KYGYVK+A+++FN+
Sbjct: 157 ILIRRSVSAGLTRQAVRAFDDMSCFVEKDAD---SDDFCYLLDTLSKYGYVKLASQIFNQ 213
Query: 711 QKWNAKLDAKLYTILVYGWCKVKRIDKARRFLDEMVEKGIEPNVVTYNVLLHGICRRASL 890
+K+ + +AK+YTIL+YGWCK+ R+ A R L EMVE+GIE NVVTYNVLL+GICRRASL
Sbjct: 214 RKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASL 273
Query: 891 HPDERFDRVIRQAEQVFDEMQERGIDPDVTSYSVLLHVYSRAHKPQLTLEKFRIMRERGI 1070
HPD+RF+R IR AE+V DEM+++GI+PDVTSYS+++HVYSRAHKP+LTL+K R+M+++GI
Sbjct: 274 HPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGI 333
Query: 1071 CPSVVTYTSVIKCLCSCAMISDAEELLNEMVSNGVCPTAATYNCFFKEYRGRKDVEKAMI 1250
P+V TYTSV+KCLCSC + DAEEL+++MV +GV P+AATYNCFFKEYRGRKD + A+
Sbjct: 334 WPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALR 393
Query: 1251 LYGKMKENGSLCSPTMHTYNILLEMFVSLNRMGYARDIWNDVKASGIGPDLDAYSLLVHG 1430
LY KMKE S C P MHTYNIL+ MFV LNRM ++IW+D+K SG GPDLD+Y+LL+HG
Sbjct: 394 LYRKMKEEYS-CLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHG 452
Query: 1431 LCDKGKWREACEYFVEMIERGYLPQKVTFEKLYKGLIQSDMLRTWRRLKKKLEEESITFG 1610
LC+K KW+EAC +FVEMIE+GYLPQK+TFE LY+GLIQSDML+TWRRLKKKLEEESITFG
Sbjct: 453 LCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFG 512
Query: 1611 SEFNSYHFQPYRR 1649
SEF YHF+PYRR
Sbjct: 513 SEFQQYHFKPYRR 525
>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 669 bits (1726), Expect = 0.0
Identities = 318/493 (64%), Positives = 402/493 (81%)
Frame = +3
Query: 171 SNDADSISQIVLHHHNPFHSMESSLQLNGISLNATLVHQILLRLQHASKVALAFFEYTQK 350
S DAD IS+I+L HHNPFH+MESSLQLNGI+L+ LVHQ LLRL++ SK+AL+FF + K
Sbjct: 50 SYDADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWA-K 108
Query: 351 CHPGYKHDSTSFNIVIDILCRVRQFDVAWQLIVQMDQQYQAHKMVNHPHAAFKPNFTTFY 530
+ HD S+N++IDIL +VRQFDVAWQ I++MDQ + +P TTF
Sbjct: 109 DQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQN------------SLEPTSTTFR 156
Query: 531 ILLRRLISAGLTRQAIRAFDEMHIFIEEESDVVWKSYFCYLLDTLCKYGYVKVATEVFNK 710
IL+RR +SAGLTRQA+RAFD+M F+E+++D FCYLLDTL KYGYVK+A+++FN+
Sbjct: 157 ILIRRSVSAGLTRQAVRAFDDMSCFVEKDAD---SDDFCYLLDTLSKYGYVKLASQIFNQ 213
Query: 711 QKWNAKLDAKLYTILVYGWCKVKRIDKARRFLDEMVEKGIEPNVVTYNVLLHGICRRASL 890
+K+ + +AK+YTIL+YGWCK+ R+ A R L EMVE+G+ NVVTYNVLL+GICR ASL
Sbjct: 214 RKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASL 273
Query: 891 HPDERFDRVIRQAEQVFDEMQERGIDPDVTSYSVLLHVYSRAHKPQLTLEKFRIMRERGI 1070
HPD+RF+R IR AE+V DEM++ GI+PDVTSYS+++HVYSRAHKP+LTL+K R+M+++GI
Sbjct: 274 HPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGI 333
Query: 1071 CPSVVTYTSVIKCLCSCAMISDAEELLNEMVSNGVCPTAATYNCFFKEYRGRKDVEKAMI 1250
P+V TYTSV+KCLCSC + DAEEL+++MV +GV P+AATYNCFFKEYRGRKD + A+
Sbjct: 334 WPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALR 393
Query: 1251 LYGKMKENGSLCSPTMHTYNILLEMFVSLNRMGYARDIWNDVKASGIGPDLDAYSLLVHG 1430
LY KMKE S C P MHTYNIL+ MFV LNRM ++IW+D+K SG GPDLD+Y+LL+HG
Sbjct: 394 LYRKMKEEYS-CLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHG 452
Query: 1431 LCDKGKWREACEYFVEMIERGYLPQKVTFEKLYKGLIQSDMLRTWRRLKKKLEEESITFG 1610
LC+K KW+EAC +FVEMIE+GYLPQK+TFE LY+GLIQSDML+TWRRLKKKLEEESITFG
Sbjct: 453 LCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFG 512
Query: 1611 SEFNSYHFQPYRR 1649
SEF YHF+PYRR
Sbjct: 513 SEFQXYHFKPYRR 525
>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 511
Score = 661 bits (1705), Expect = 0.0
Identities = 316/493 (64%), Positives = 401/493 (81%)
Frame = +3
Query: 171 SNDADSISQIVLHHHNPFHSMESSLQLNGISLNATLVHQILLRLQHASKVALAFFEYTQK 350
SNDA+ +S+I+L+HHNPFH+MESSLQL+GI+L+++L+HQ LLRL+H SK+AL+FF Y+
Sbjct: 36 SNDAEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLS 95
Query: 351 CHPGYKHDSTSFNIVIDILCRVRQFDVAWQLIVQMDQQYQAHKMVNHPHAAFKPNFTTFY 530
P ++T++N++IDIL +VRQFDV+WQLI+QMDQ +PN TF
Sbjct: 96 L-PSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNN------------LQPNSHTFL 142
Query: 531 ILLRRLISAGLTRQAIRAFDEMHIFIEEESDVVWKSYFCYLLDTLCKYGYVKVATEVFNK 710
IL+RRLISAG TRQAIRAFD+M FI E V +++FC+LLDTLCKYGY+KVA EVFNK
Sbjct: 143 ILIRRLISAGFTRQAIRAFDDMESFIAE---TVNQTHFCFLLDTLCKYGYIKVAVEVFNK 199
Query: 711 QKWNAKLDAKLYTILVYGWCKVKRIDKARRFLDEMVEKGIEPNVVTYNVLLHGICRRASL 890
+K+ + ++YT+L+YGWCK+ RID A RF+ EM E GIE NVVTYNVLL GICRRA L
Sbjct: 200 RKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKL 259
Query: 891 HPDERFDRVIRQAEQVFDEMQERGIDPDVTSYSVLLHVYSRAHKPQLTLEKFRIMRERGI 1070
P+ RF+R I +A++VFDEM+++GI+PDVTS+S+LLHVYSRAHKPQLT++K ++M E GI
Sbjct: 260 QPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGI 319
Query: 1071 CPSVVTYTSVIKCLCSCAMISDAEELLNEMVSNGVCPTAATYNCFFKEYRGRKDVEKAMI 1250
CP+V TYTSV+KCLCSC I DAEELL +MV NGV P AATYNCFFKEYRGRKD E A+
Sbjct: 320 CPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALK 379
Query: 1251 LYGKMKENGSLCSPTMHTYNILLEMFVSLNRMGYARDIWNDVKASGIGPDLDAYSLLVHG 1430
LY K+++ +LC P++HTYNILL MF+ LNR +IWND+++SG GPDLD+Y+LLVHG
Sbjct: 380 LYRKIRQE-NLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHG 438
Query: 1431 LCDKGKWREACEYFVEMIERGYLPQKVTFEKLYKGLIQSDMLRTWRRLKKKLEEESITFG 1610
LC+K KW++AC++FVEMIE+G LPQK TFE LY GLIQS+MLRTWRRLKKKL+EESI FG
Sbjct: 439 LCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDEESIAFG 498
Query: 1611 SEFNSYHFQPYRR 1649
SEF++YH +PYRR
Sbjct: 499 SEFSNYHLKPYRR 511
>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
predicted protein [Populus trichocarpa]
Length = 548
Score = 657 bits (1695), Expect = 0.0
Identities = 321/511 (62%), Positives = 397/511 (77%), Gaps = 18/511 (3%)
Frame = +3
Query: 171 SNDADSISQIVLHHHNPFHSMESSLQLNGISLNATLVHQILLRLQHASKVALAFFEYTQK 350
SNDAD +SQI+LHHHNPFH+MESSLQL GISL +L+HQ LLRL+H SK+AL+ F ++
Sbjct: 54 SNDADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNSKIALSLFHHSLS 113
Query: 351 CHPGYKHD------------------STSFNIVIDILCRVRQFDVAWQLIVQMDQQYQAH 476
P + + ++N++IDIL +VRQFDV WQLIV+MDQ+
Sbjct: 114 LPPTSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAKVRQFDVCWQLIVEMDQRN--- 170
Query: 477 KMVNHPHAAFKPNFTTFYILLRRLISAGLTRQAIRAFDEMHIFIEEESDVVWKSYFCYLL 656
KP TF++L+RRL++AGLTRQAIRAFD+M F+ E V +++FC+LL
Sbjct: 171 ---------VKPTSETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEP---VNETHFCFLL 218
Query: 657 DTLCKYGYVKVATEVFNKQKWNAKLDAKLYTILVYGWCKVKRIDKARRFLDEMVEKGIEP 836
DTLCKYGYVKV E+FNK+K + K+YT+L+YGWCK+ RID A RFL E E+GIE
Sbjct: 219 DTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEA 278
Query: 837 NVVTYNVLLHGICRRASLHPDERFDRVIRQAEQVFDEMQERGIDPDVTSYSVLLHVYSRA 1016
VVTYNVLL+GICRRASLHP+ RF+R I AE +FDEM+ERGI+PDVTS+S++LHVYSRA
Sbjct: 279 TVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYSRA 338
Query: 1017 HKPQLTLEKFRIMRERGICPSVVTYTSVIKCLCSCAMISDAEELLNEMVSNGVCPTAATY 1196
HKP+LTL+K ++M+E+GICPSVVTYTSV+KCLCSC I DAEELL EMV NGV TA TY
Sbjct: 339 HKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTY 398
Query: 1197 NCFFKEYRGRKDVEKAMILYGKMKENGSLCSPTMHTYNILLEMFVSLNRMGYARDIWNDV 1376
NCFFKEY GRKD E A+ LY KM+E+G L S +H+YNILL MF+ LNR+ +IW D+
Sbjct: 399 NCFFKEYMGRKDAESALKLYKKMREDG-LGSLGLHSYNILLRMFMMLNRLDIVNEIWEDL 457
Query: 1377 KASGIGPDLDAYSLLVHGLCDKGKWREACEYFVEMIERGYLPQKVTFEKLYKGLIQSDML 1556
K+SG+GPDLD+Y++L+HGLC+K KWREAC++FVEMIE+G LPQKVTFE LYKGLIQSDML
Sbjct: 458 KSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDML 517
Query: 1557 RTWRRLKKKLEEESITFGSEFNSYHFQPYRR 1649
RTWRRLKKKL+EESITFGSEF +Y +PYRR
Sbjct: 518 RTWRRLKKKLDEESITFGSEFQNYQLKPYRR 548
>ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 628 bits (1620), Expect = e-177
Identities = 303/493 (61%), Positives = 386/493 (78%)
Frame = +3
Query: 171 SNDADSISQIVLHHHNPFHSMESSLQLNGISLNATLVHQILLRLQHASKVALAFFEYTQK 350
S DAD +SQI+LHHHNPFHSMESSLQL+ IS ++ L+ Q LLRL H SK+AL+FF+Y
Sbjct: 35 SKDADLVSQILLHHHNPFHSMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANS 94
Query: 351 CHPGYKHDSTSFNIVIDILCRVRQFDVAWQLIVQMDQQYQAHKMVNHPHAAFKPNFTTFY 530
P +TS+NI++DIL +VRQFD AW LI+QMD HK + TF
Sbjct: 95 L-PSNPISTTSYNILLDILAKVRQFDAAWHLILQMD-----HKGTD-----------TFL 137
Query: 531 ILLRRLISAGLTRQAIRAFDEMHIFIEEESDVVWKSYFCYLLDTLCKYGYVKVATEVFNK 710
+L+RRLIS+G TRQAIRAFD++ + + FCYLLD LCKYGYVKVA EVFNK
Sbjct: 138 LLIRRLISSGRTRQAIRAFDDIEGLTGNKVGI---DDFCYLLDVLCKYGYVKVAVEVFNK 194
Query: 711 QKWNAKLDAKLYTILVYGWCKVKRIDKARRFLDEMVEKGIEPNVVTYNVLLHGICRRASL 890
+K +D K+YTIL+YGWCK+ R + A RFL +MVE+GIEPNVVTYNVLL+G+CRRASL
Sbjct: 195 RKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASL 254
Query: 891 HPDERFDRVIRQAEQVFDEMQERGIDPDVTSYSVLLHVYSRAHKPQLTLEKFRIMRERGI 1070
HP+ RF++ IR AE+VFDEM++RGI+PDVTS+S++LHVYSRAHKP+L+L+K + M+E GI
Sbjct: 255 HPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGI 314
Query: 1071 CPSVVTYTSVIKCLCSCAMISDAEELLNEMVSNGVCPTAATYNCFFKEYRGRKDVEKAMI 1250
P+V TYTSVIKCLCSC + D E L+ EMV +G+ P+ TYNCFFKEYRGRKD A+
Sbjct: 315 SPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALR 374
Query: 1251 LYGKMKENGSLCSPTMHTYNILLEMFVSLNRMGYARDIWNDVKASGIGPDLDAYSLLVHG 1430
LY KM+E+ LC+P++HTYNILL +F++L++ +++WND+K SG+GPDLD+Y+ ++HG
Sbjct: 375 LYKKMRED-CLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHG 433
Query: 1431 LCDKGKWREACEYFVEMIERGYLPQKVTFEKLYKGLIQSDMLRTWRRLKKKLEEESITFG 1610
LC+K +W EAC++FVEMIERG+LPQKVTFE LY+GLIQSDMLRTWRRLKKKLEEES T+G
Sbjct: 434 LCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYG 493
Query: 1611 SEFNSYHFQPYRR 1649
SE +YH +PY R
Sbjct: 494 SELKNYHIKPYMR 506