BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029466
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   117   2e-31
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   117   2e-31
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             115   1e-29
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   110   4e-29
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    99   2e-27

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  117 bits (292), Expect(2) = 2e-31
 Identities = 52/111 (46%), Positives = 76/111 (68%)
 Frame = -2

Query: 800 KNPFMSLKLNMSKAYDRVEWKFLESIILRFGFTCVWVDWTMXXXXXXXXXXXVDGAPRGF 621
           K  +M++K +MSKAYDRVEW FL +++L+ GF   WVDW +           ++G+P+GF
Sbjct: 514 KKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGF 573

Query: 620 IRPTKGARQGDLLSPYMFLLCAERLTCMLRDAEERKALTGVKISRESPSIS 468
           I+P++G RQGD +SP++F+LC E L   L+DAE    + G++ISR SPS S
Sbjct: 574 IKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQISRASPSTS 624



 Score = 45.4 bits (106), Expect(2) = 2e-31
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -1

Query: 468 HILFADDTMLFCRALVREGQEIMRILQDYETASGQKIN 355
           H+LFADD++ FC+A   +G+EI+ IL+ Y  ASGQ++N
Sbjct: 625 HLLFADDSLFFCKADPLQGKEIIDILRLYGEASGQQLN 662


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  117 bits (292), Expect(2) = 2e-31
 Identities = 52/111 (46%), Positives = 76/111 (68%)
 Frame = -2

Query: 800 KNPFMSLKLNMSKAYDRVEWKFLESIILRFGFTCVWVDWTMXXXXXXXXXXXVDGAPRGF 621
           K  +M++K +MSKAYDRVEW FL +++L+ GF   WVDW +           ++G+P+GF
Sbjct: 148 KKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGF 207

Query: 620 IRPTKGARQGDLLSPYMFLLCAERLTCMLRDAEERKALTGVKISRESPSIS 468
           I+P++G RQGD +SP++F+LC E L   L+DAE    + G++ISR SPS S
Sbjct: 208 IKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQISRASPSTS 258



 Score = 45.4 bits (106), Expect(2) = 2e-31
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -1

Query: 468 HILFADDTMLFCRALVREGQEIMRILQDYETASGQKIN 355
           H+LFADD++ FC+A   +G+EI+ IL+ Y  ASGQ++N
Sbjct: 259 HLLFADDSLFFCKADPLQGKEIIDILRLYGEASGQQLN 296


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  115 bits (289), Expect(2) = 1e-29
 Identities = 52/111 (46%), Positives = 72/111 (64%)
 Frame = -2

Query: 800 KNPFMSLKLNMSKAYDRVEWKFLESIILRFGFTCVWVDWTMXXXXXXXXXXXVDGAPRGF 621
           K  FM++K +MSKAYDRVEW F+E ++ + GF   W+ W M           ++G PRG 
Sbjct: 417 KGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCITTVQYRVLLNGQPRGL 476

Query: 620 IRPTKGARQGDLLSPYMFLLCAERLTCMLRDAEERKALTGVKISRESPSIS 468
           I P +G RQGD LSPY+F+LC E L   +R AE+ K +TG+K++  SPS+S
Sbjct: 477 IVPKRGLRQGDPLSPYLFILCTEVLIANIRKAEQEKLITGIKVATASPSVS 527



 Score = 40.8 bits (94), Expect(2) = 1e-29
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = -1

Query: 468 HILFADDTMLFCRALVREGQEIMRILQDYETASGQKIN 355
           H+LFA+D++ FC+A   +   I+ IL+ YE  SGQ IN
Sbjct: 528 HLLFANDSLFFCKANKEQCGVILGILKQYEAVSGQMIN 565


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  110 bits (275), Expect(2) = 4e-29
 Identities = 48/111 (43%), Positives = 73/111 (65%)
 Frame = -2

Query: 800 KNPFMSLKLNMSKAYDRVEWKFLESIILRFGFTCVWVDWTMXXXXXXXXXXXVDGAPRGF 621
           K+ FM++K +MSKAYD+VEW F+E+++ + GF   W+ W M           ++G P+G 
Sbjct: 351 KDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGL 410

Query: 620 IRPTKGARQGDLLSPYMFLLCAERLTCMLRDAEERKALTGVKISRESPSIS 468
           I P +G RQGD LSPY+F+LC E L   +R AE +  +TG+K++  SP++S
Sbjct: 411 IIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVS 461



 Score = 44.3 bits (103), Expect(2) = 4e-29
 Identities = 19/38 (50%), Positives = 28/38 (73%)
 Frame = -1

Query: 468 HILFADDTMLFCRALVREGQEIMRILQDYETASGQKIN 355
           H+LFADD++ FC+A   +   I+ IL+ YE+ SGQ+IN
Sbjct: 462 HLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQIN 499


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 99.0 bits (245), Expect(2) = 2e-27
 Identities = 51/111 (45%), Positives = 70/111 (63%)
 Frame = -2

Query: 800 KNPFMSLKLNMSKAYDRVEWKFLESIILRFGFTCVWVDWTMXXXXXXXXXXXVDGAPRGF 621
           K  ++ LKL+MSKAYDRVEW FLE+++L+ GF   +    M           V+G P   
Sbjct: 576 KKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRN 635

Query: 620 IRPTKGARQGDLLSPYMFLLCAERLTCMLRDAEERKALTGVKISRESPSIS 468
             P++G RQGD LSP++F++CAE L+ +LRDAEE+K + GVKI      IS
Sbjct: 636 FFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPIS 686



 Score = 50.1 bits (118), Expect(2) = 2e-27
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = -1

Query: 486 RVSKY*HILFADDTMLFCRALVREGQEIMRILQDYETASGQKIN 355
           RVS   H+ FADD++LF RA   E + +M IL  YE ASGQK+N
Sbjct: 681 RVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLN 724