BLASTX nr result

ID: Lithospermum22_contig00029464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029464
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786...   143   2e-59
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ...   148   5e-57
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   150   8e-57
ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [S...   154   8e-57
emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]           155   1e-56

>ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786145 [Glycine max]
          Length = 649

 Score =  143 bits (360), Expect(2) = 2e-59
 Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
 Frame = +1

Query: 10  YVTILGFSHSISDNSLFIFRRGHQVAYILLYMXXXXXXXXXXXXRTSIMTHLYSEFAMKD 189
           Y   L  + S +++SLFI+  G    YILLY+            R +I+  L SEF+M D
Sbjct: 88  YKARLVVNGSKTNHSLFIYTHGDDTTYILLYVDDIIHTTSSHSLRDTIIAALRSEFSMMD 147

Query: 190 LGPLSYSLGISINRASDHIFLSQKKYATEIIEKARMSSCKSSST-VDCMAKLSSSSENYY 366
           LGPL+Y LG+S  R S  +FL Q KYA +II +A+M +CK + T +D  +KLS++S   +
Sbjct: 148 LGPLNYFLGVSTTRHSGGLFLHQSKYAEDIISRAKMVNCKPALTPMDTKSKLSATSGEKF 207

Query: 367 HNPTEYRSLARAL*YLILTRPDISYAVQQIGLFMHDPHTQHMNALKRI 510
            +PT Y SL  AL YL  TRPDISYAVQQI L+MHDP T H   LK I
Sbjct: 208 DDPTLYHSLVDALQYLTFTRPDISYAVQQICLYMHDPRTSHFATLKHI 255



 Score =  112 bits (281), Expect(2) = 2e-59
 Identities = 53/76 (69%), Positives = 62/76 (81%)
 Frame = +3

Query: 498 IETYQDTLDYGLHLYPSSLSKLASLTDANWGDCPDTRRSTSGYCVYLGYNLISWSIKIQP 677
           I   Q   ++GLHL PS+++ L++ +DA+WGDCPDTRRSTSGYCVYLG NLISWS K Q 
Sbjct: 256 IRYIQGRKEFGLHLSPSTITNLSTYSDADWGDCPDTRRSTSGYCVYLGDNLISWSSKRQE 315

Query: 678 TLSRSSAEAEYRGVAN 725
           TLSRSSAE EYRGVAN
Sbjct: 316 TLSRSSAEVEYRGVAN 331


>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
           gi|241947225|gb|EES20370.1| hypothetical protein
           SORBIDRAFT_0019s003280 [Sorghum bicolor]
          Length = 761

 Score =  148 bits (373), Expect(2) = 5e-57
 Identities = 82/171 (47%), Positives = 106/171 (61%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   FSDYVTILGFSHSISDNSLFIFRRGHQVAYILLYMXXXXXXXXXXXXRTSIMTHLYSEFA 180
           F+ ++  LGFS + SD SLFIF RG + AY+LLY+               ++  L   FA
Sbjct: 407 FASHLLSLGFSEARSDTSLFIFHRGTETAYLLLYVDDIVLTASSQQLLHRVIEALKKAFA 466

Query: 181 MKDLGPLSYSLGISINRASDHIFLSQKKYATEIIEKARMSSCKSSST-VDCMAKLSSSSE 357
           MKDLGPL + LG+ + +  + +FLSQ++Y  +II +  MS CK  ST VD  AK+S+S  
Sbjct: 467 MKDLGPLHHFLGMHVEQQGNSLFLSQRQYTLDIITRNGMSDCKPCSTPVDTCAKVSASDG 526

Query: 358 NYYHNPTEYRSLARAL*YLILTRPDISYAVQQIGLFMHDPHTQHMNALKRI 510
               +PT YRSLA AL YL  TRPDI+YAVQQI L MHDP   H+ A KRI
Sbjct: 527 PSVTDPTAYRSLAGALQYLTFTRPDIAYAVQQICLHMHDPRESHLTAAKRI 577



 Score = 99.8 bits (247), Expect(2) = 5e-57
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = +3

Query: 516 TLDYGLHLYPSSLSKLASLTDANWGDCPDTRRSTSGYCVYLGYNLISWSIKIQPTLSRSS 695
           TLDYGL +  SS S+L   TDA+W  CPDTRRSTSGY V+LG +L+SWS K QPT+SRSS
Sbjct: 584 TLDYGLVIPRSSPSQLTVYTDADWAGCPDTRRSTSGYAVFLGSSLVSWSSKRQPTVSRSS 643

Query: 696 AEAEYRGVAN 725
           AEAEYR VAN
Sbjct: 644 AEAEYRAVAN 653


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  150 bits (380), Expect(2) = 8e-57
 Identities = 80/171 (46%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1    FSDYVTILGFSHSISDNSLFIFRRGHQVAYILLYMXXXXXXXXXXXXRTSIMTHLYSEFA 180
            F+D+ T LGF  S +D SLF+ RRG   AY+LLY+               I+  L +EF 
Sbjct: 1055 FADHATSLGFVQSRADPSLFVLRRGSDTAYLLLYVDDMILSASSSSLLQRIIDRLQAEFK 1114

Query: 181  MKDLGPLSYSLGISINRASDHIFLSQKKYATEIIEKARMSSCKSSST-VDCMAKLSSSSE 357
            +KD+GPL Y LGI + R +D   LSQ KYAT+++E+A M++CK+ +T  D   KLSS   
Sbjct: 1115 VKDMGPLKYFLGIEVQRTADGFVLSQSKYATDVLERAGMANCKAVATPADAKPKLSSDEG 1174

Query: 358  NYYHNPTEYRSLARAL*YLILTRPDISYAVQQIGLFMHDPHTQHMNALKRI 510
              + + + YRS+A AL YL LTRPDI+YAVQQ+ L MH P   H+  LKRI
Sbjct: 1175 PLFQDSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRI 1225



 Score = 96.3 bits (238), Expect(2) = 8e-57
 Identities = 45/70 (64%), Positives = 55/70 (78%)
 Frame = +3

Query: 516  TLDYGLHLYPSSLSKLASLTDANWGDCPDTRRSTSGYCVYLGYNLISWSIKIQPTLSRSS 695
            T  +GLHL  S+   L + +DA+W  CPDTRRSTSG+C++LG +LISWS K Q T+SRSS
Sbjct: 1232 TAAFGLHLRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSS 1291

Query: 696  AEAEYRGVAN 725
            AEAEYRGVAN
Sbjct: 1292 AEAEYRGVAN 1301


>ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
           gi|241943826|gb|EES16971.1| hypothetical protein
           SORBIDRAFT_08g010840 [Sorghum bicolor]
          Length = 725

 Score =  154 bits (390), Expect(2) = 8e-57
 Identities = 83/171 (48%), Positives = 113/171 (66%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1   FSDYVTILGFSHSISDNSLFIFRRGHQVAYILLYMXXXXXXXXXXXXRTSIMTHLYSEFA 180
           F+ YV  LGF  S +D SLF++  G   AY+LLY+               I+  L+SEFA
Sbjct: 467 FATYVRQLGFVASATDTSLFVYTEGGASAYLLLYVDDIVLTASSDALLRCIIDRLHSEFA 526

Query: 181 MKDLGPLSYSLGISINRASDHIFLSQKKYATEIIEKARMSSCKSSST-VDCMAKLSSSSE 357
           M DLG L + LGIS+ R+SD +FLSQ++YA ++++KA M+ C S+ST VD  AKLS++  
Sbjct: 527 MTDLGELHHFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAECHSTSTPVDSRAKLSATEG 586

Query: 358 NYYHNPTEYRSLARAL*YLILTRPDISYAVQQIGLFMHDPHTQHMNALKRI 510
               +P+ YRSLA +L YL LTRPD++YAVQQ+ LFMHDP   H+  +KRI
Sbjct: 587 APVADPSAYRSLAGSLQYLTLTRPDLAYAVQQVCLFMHDPREAHLALIKRI 637



 Score = 92.4 bits (228), Expect(2) = 8e-57
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = +3

Query: 516 TLDYGLHLYPSSLSKLASLTDANWGDCPDTRRSTSGYCVYLGYNLISWSIKIQPTLSRSS 695
           TL  GLH+    + KL + +DA+W  CPD+RRSTSG+CV+LG +L+SWS K Q T+SRSS
Sbjct: 644 TLSAGLHIGTGPVDKLIAYSDADWAGCPDSRRSTSGFCVFLGDSLVSWSSKRQTTVSRSS 703

Query: 696 AEAEYRGVANV 728
           AEAEYR VA+V
Sbjct: 704 AEAEYRAVAHV 714


>emb|CAH66488.1| OSIGBa0076I14.9 [Oryza sativa Indica Group]
          Length = 1455

 Score =  155 bits (392), Expect(2) = 1e-56
 Identities = 84/171 (49%), Positives = 112/171 (65%), Gaps = 1/171 (0%)
 Frame = +1

Query: 1    FSDYVTILGFSHSISDNSLFIFRRGHQVAYILLYMXXXXXXXXXXXXRTSIMTHLYSEFA 180
            F+ Y+  LGF+ S SD SLFI R G ++AY+LLY+               I   L++EFA
Sbjct: 1101 FATYIRQLGFTPSASDTSLFILRDGDRLAYLLLYVDDIILMASSAELLCHITARLHTEFA 1160

Query: 181  MKDLGPLSYSLGISINRASDHIFLSQKKYATEIIEKARMSSCKSSST-VDCMAKLSSSSE 357
            M DLG L + LGIS+ R  D +FLSQ++YA +++++A MS    ++T VD  AKLS+S  
Sbjct: 1161 MTDLGDLHFFLGISVRRTPDDLFLSQRQYAVDLLQRAGMSEYHPTATPVDARAKLSASEG 1220

Query: 358  NYYHNPTEYRSLARAL*YLILTRPDISYAVQQIGLFMHDPHTQHMNALKRI 510
                +PTEYRSLA AL YL LTRP+I+YAVQQ+  FMHDPH  H+  +KRI
Sbjct: 1221 APVADPTEYRSLADALQYLTLTRPEIAYAVQQVCRFMHDPHEPHLALVKRI 1271



 Score = 90.9 bits (224), Expect(2) = 1e-56
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = +3

Query: 516  TLDYGLHLYPSSLSKLASLTDANWGDCPDTRRSTSGYCVYLGYNLISWSIKIQPTLSRSS 695
            +L  GLH+    +  L + +DA+W  CPD+RRSTSGYC++LG NL+SWS K Q T+SRSS
Sbjct: 1278 SLSAGLHIGTGPVGSLTAYSDADWAGCPDSRRSTSGYCIFLGDNLVSWSSKRQTTVSRSS 1337

Query: 696  AEAEYRGVAN 725
            AEAEYR VA+
Sbjct: 1338 AEAEYRAVAH 1347


Top