BLASTX nr result

ID: Lithospermum22_contig00029421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029421
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...    95   1e-17
ref|XP_003534091.1| PREDICTED: eukaryotic translation initiation...    94   2e-17
gb|AFK36350.1| unknown [Lotus japonicus]                               93   4e-17
ref|XP_003548304.1| PREDICTED: eukaryotic translation initiation...    92   8e-17
ref|NP_564865.1| Translation initiation factor eIF3 subunit [Ara...    92   1e-16

>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = -2

Query: 653 PKSESDFMEYAELISHKLRPYEKSYHYIGLLKTVMRLSLTTLKGADAKDVAS 498
           PKSESDF+EYAEL+SHKLRPYEKS+HYIGLLK VMRLS+T +K ADAKDVAS
Sbjct: 119 PKSESDFLEYAELVSHKLRPYEKSFHYIGLLKAVMRLSMTAMKAADAKDVAS 170


>ref|XP_003534091.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Glycine max]
          Length = 229

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -2

Query: 653 PKSESDFMEYAELISHKLRPYEKSYHYIGLLKTVMRLSLTTLKGADAKDVAS 498
           PKSESDF+EYAELISHKLR +EKSYHYIGLLK VMRLS T+LKGADAKD+AS
Sbjct: 124 PKSESDFLEYAELISHKLRAFEKSYHYIGLLKAVMRLSTTSLKGADAKDIAS 175


>gb|AFK36350.1| unknown [Lotus japonicus]
          Length = 225

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 43/52 (82%), Positives = 50/52 (96%)
 Frame = -2

Query: 653 PKSESDFMEYAELISHKLRPYEKSYHYIGLLKTVMRLSLTTLKGADAKDVAS 498
           PKSESDF+EYAELISH+LR +EKSYHY+GLLK VMRLS+T+LKGADAKD+AS
Sbjct: 121 PKSESDFLEYAELISHRLRSFEKSYHYMGLLKAVMRLSMTSLKGADAKDIAS 172


>ref|XP_003548304.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           J-like [Glycine max]
          Length = 229

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -2

Query: 653 PKSESDFMEYAELISHKLRPYEKSYHYIGLLKTVMRLSLTTLKGADAKDVAS 498
           PKSESDF+EYAELISHKLR +EKSYHYIGLLK VMRLS  +LKGADAKD+AS
Sbjct: 124 PKSESDFLEYAELISHKLRAFEKSYHYIGLLKAVMRLSTISLKGADAKDIAS 175


>ref|NP_564865.1| Translation initiation factor eIF3 subunit [Arabidopsis thaliana]
           gi|334183669|ref|NP_001185326.1| Translation initiation
           factor eIF3 subunit [Arabidopsis thaliana]
           gi|12322607|gb|AAG51301.1|AC026480_8 unknown protein
           [Arabidopsis thaliana] gi|17380828|gb|AAL36101.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259027|gb|AAM14229.1| unknown protein [Arabidopsis
           thaliana] gi|332196337|gb|AEE34458.1| Translation
           initiation factor eIF3 subunit [Arabidopsis thaliana]
           gi|332196338|gb|AEE34459.1| Translation initiation
           factor eIF3 subunit [Arabidopsis thaliana]
          Length = 226

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 41/52 (78%), Positives = 48/52 (92%)
 Frame = -2

Query: 653 PKSESDFMEYAELISHKLRPYEKSYHYIGLLKTVMRLSLTTLKGADAKDVAS 498
           PKSESDF+EYAE+ISH+++PYEKSYHYI LLKT+MRLSLT +K AD KDVAS
Sbjct: 123 PKSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVAS 174


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