BLASTX nr result

ID: Lithospermum22_contig00029388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029388
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat...    91   1e-16
emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]    91   1e-16
ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15
ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago ...    86   2e-15
ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat...    84   2e-14

>ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Vitis vinifera]
           gi|297744381|emb|CBI37355.3| unnamed protein product
           [Vitis vinifera]
          Length = 601

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/75 (54%), Positives = 59/75 (78%)
 Frame = +2

Query: 5   SLINSYSKLELISEAHKLFDEIAEPTVVSWNTIISGYVRSGQCRNALYMFLQLEKSDISS 184
           +L+N Y ++E + +AH +F EI EP+VVSWN++ISGY  +GQ R AL +FL+LE+SDI +
Sbjct: 119 ALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICA 178

Query: 185 DSYSLTAALSACGQL 229
           D++S TAAL+ CG L
Sbjct: 179 DAFSFTAALATCGHL 193


>emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
          Length = 625

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/75 (54%), Positives = 59/75 (78%)
 Frame = +2

Query: 5   SLINSYSKLELISEAHKLFDEIAEPTVVSWNTIISGYVRSGQCRNALYMFLQLEKSDISS 184
           +L+N Y ++E + +AH +F EI EP+VVSWN++ISGY  +GQ R AL +FL+LE+SDI +
Sbjct: 143 ALLNFYIRIESLKDAHNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICA 202

Query: 185 DSYSLTAALSACGQL 229
           D++S TAAL+ CG L
Sbjct: 203 DAFSFTAALATCGHL 217


>ref|XP_003538739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Glycine max]
          Length = 585

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/75 (57%), Positives = 55/75 (73%)
 Frame = +2

Query: 5   SLINSYSKLELISEAHKLFDEIAEPTVVSWNTIISGYVRSGQCRNALYMFLQLEKSDISS 184
           SLI  Y +    S+AHKLF EIAEP+VV+WNT+ISGYV +GQ RNAL  F  L++S + +
Sbjct: 106 SLIKLYVRTHSFSDAHKLFVEIAEPSVVTWNTLISGYVHTGQFRNALSFFTLLDRSHVCA 165

Query: 185 DSYSLTAALSACGQL 229
           D+ S T+ALSAC  L
Sbjct: 166 DAVSFTSALSACSLL 180


>ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
           gi|355512648|gb|AES94271.1| hypothetical protein
           MTR_5g012660 [Medicago truncatula]
          Length = 519

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/75 (53%), Positives = 55/75 (73%)
 Frame = +2

Query: 5   SLINSYSKLELISEAHKLFDEIAEPTVVSWNTIISGYVRSGQCRNALYMFLQLEKSDISS 184
           +LI  Y K+ L + AH LF EI +P VVSWNT+ISGYV +GQ + AL +F +LE+S I +
Sbjct: 46  TLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICA 105

Query: 185 DSYSLTAALSACGQL 229
           D++S T+A+ AC QL
Sbjct: 106 DAFSFTSAMVACAQL 120


>ref|XP_004162352.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g47460-like [Cucumis sativus]
          Length = 639

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/75 (53%), Positives = 54/75 (72%)
 Frame = +2

Query: 5   SLINSYSKLELISEAHKLFDEIAEPTVVSWNTIISGYVRSGQCRNALYMFLQLEKSDISS 184
           +++N Y K E    AHKLFDE+ +P++V+WN++ISGYV  GQ R AL +F+QL+ S    
Sbjct: 113 AMVNFYIKTESFDSAHKLFDEMPQPSLVTWNSLISGYVHCGQFRKALCLFIQLDGSGNLV 172

Query: 185 DSYSLTAALSACGQL 229
           DSYSL+ ALSA G L
Sbjct: 173 DSYSLSIALSASGHL 187


Top