BLASTX nr result

ID: Lithospermum22_contig00029374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029374
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2...   250   7e-64
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu...   247   4e-63
ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   247   6e-63
ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2...   242   1e-61
emb|CBI35338.3| unnamed protein product [Vitis vinifera]              233   9e-59

>ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1|
            predicted protein [Populus trichocarpa]
          Length = 728

 Score =  250 bits (638), Expect = 7e-64
 Identities = 140/250 (56%), Positives = 170/250 (68%), Gaps = 12/250 (4%)
 Frame = -3

Query: 1298 DTFGHNHITKASSMEVPRTGRIRKLSTRLERRERVFPV-----GDHASTSIPETVPPLRH 1134
            +T GH     A S+E  + GR+R L    E+R           G  A TS    V PL  
Sbjct: 479  ETRGHKINRDAPSIESQKGGRMRSLMINWEKRGSSPSYEGPTSGISAGTSSVVNVLPLHM 538

Query: 1133 YSSYPGA-------VAGSEEDAIHDLMEQHDQFILSMHSRLAKLQAVHKYWQRHDIRGAL 975
            +     A       V+ S+ED I DLMEQHDQF+ SM SR AKLQ VH+YW+R+D++GA+
Sbjct: 539  FKQRGRAPSIEKEMVSASDEDVIADLMEQHDQFVSSMQSRSAKLQVVHRYWERNDVKGAI 598

Query: 974  SAMEKLADHAVLADVLGLLMDKMDTVTLEICTSXXXXXXXXLESDMDRHQDISLEMLLKL 795
             AM K+ADHAVLADV+ ++ DK+DTVTL+ICT         LESDMDRH  ISL+MLLKL
Sbjct: 599  GAMGKMADHAVLADVISIVADKIDTVTLDICTCLLPLLTNLLESDMDRHSSISLDMLLKL 658

Query: 794  VKVFGQVIYYSLSAPSSVGVDIEAEQRFERCNLCFIELEKVKRHLPDLSRKGGSIAKSAQ 615
            V+ FG +IY +LSA +SVGVDIEAEQR ERCN+CF+ELEKVKR L  L+RKGGS+AK AQ
Sbjct: 659  VRTFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKYAQ 718

Query: 614  ELNLVLQEVS 585
            ELNL LQEVS
Sbjct: 719  ELNLALQEVS 728


>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 803

 Score =  247 bits (631), Expect = 4e-63
 Identities = 132/254 (51%), Positives = 172/254 (67%), Gaps = 12/254 (4%)
 Frame = -3

Query: 1310 QQEYDTFGHNHITKASSMEVPRTGRIRKLSTRLERRERVFPVGDHASTSIPETVPPLRHY 1131
            ++ Y+T GH     A+S+E  + GR+R L    E+R R        S S PET   +   
Sbjct: 550  EENYETRGHKLNRDATSLEGQKAGRMRSLVINWEKRGRSPNYEGPISGSSPETASSVNML 609

Query: 1130 S------------SYPGAVAGSEEDAIHDLMEQHDQFILSMHSRLAKLQAVHKYWQRHDI 987
            S            +    V+ S+EDAI D+MEQHDQF+ SM SR  KLQAVH++W+R+D+
Sbjct: 610  SFNMLKQRGCSPTTEKEMVSASDEDAIADVMEQHDQFVSSMQSRFGKLQAVHRFWERNDV 669

Query: 986  RGALSAMEKLADHAVLADVLGLLMDKMDTVTLEICTSXXXXXXXXLESDMDRHQDISLEM 807
            +GA+SAMEK+ADH VLADV+ ++ +K+D VTL++CT         LESDMDRH  ISL++
Sbjct: 670  KGAISAMEKMADHGVLADVISVINEKIDIVTLDVCTCLLPLLAGLLESDMDRHLSISLDV 729

Query: 806  LLKLVKVFGQVIYYSLSAPSSVGVDIEAEQRFERCNLCFIELEKVKRHLPDLSRKGGSIA 627
            LLKLV+ FG +IY ++SA + VGVDIEAEQR ERCNLCF+ELEKVKR LP L R+GGS+A
Sbjct: 730  LLKLVRTFGSMIYSTVSASTPVGVDIEAEQRLERCNLCFVELEKVKRCLPTLMRRGGSVA 789

Query: 626  KSAQELNLVLQEVS 585
            K  QELNL LQ+ S
Sbjct: 790  KITQELNLALQDDS 803


>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Vitis vinifera]
          Length = 800

 Score =  247 bits (630), Expect = 6e-63
 Identities = 138/253 (54%), Positives = 174/253 (68%), Gaps = 13/253 (5%)
 Frame = -3

Query: 1307 QEYDTFGHNHITKASSMEVPRTGRIRKLSTRLERRERVFPVGD-----------HASTSI 1161
            + Y+T  H     A S+EV + GR R L    E+RE + P  +            AS  +
Sbjct: 548  ENYETRVHRANRDACSIEVQKGGRTRSLVANWEKRE-ISPTYEGQTSSNFSGTVSASNML 606

Query: 1160 PETVPPLRHY--SSYPGAVAGSEEDAIHDLMEQHDQFILSMHSRLAKLQAVHKYWQRHDI 987
            P +    R Y  S+   AV  S+EDAI D+MEQH QF+ S+ SRL+KLQ VH++W+R+DI
Sbjct: 607  PFSAVKQRGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWERNDI 666

Query: 986  RGALSAMEKLADHAVLADVLGLLMDKMDTVTLEICTSXXXXXXXXLESDMDRHQDISLEM 807
            +GA+ AMEK+ADH+V ADV+ +L +K D VTLEICTS        LES+MDRH  ISLEM
Sbjct: 667  KGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGISLEM 726

Query: 806  LLKLVKVFGQVIYYSLSAPSSVGVDIEAEQRFERCNLCFIELEKVKRHLPDLSRKGGSIA 627
            LLKLV++FG VI+ +LSA SSVGVDI+AEQR ERCNLCFIELEK+K  LP L+R+GGS+A
Sbjct: 727  LLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVA 786

Query: 626  KSAQELNLVLQEV 588
            K AQELNL L EV
Sbjct: 787  KLAQELNLALLEV 799


>ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1|
            predicted protein [Populus trichocarpa]
          Length = 802

 Score =  242 bits (618), Expect = 1e-61
 Identities = 134/254 (52%), Positives = 170/254 (66%), Gaps = 12/254 (4%)
 Frame = -3

Query: 1310 QQEYDTFGHNHITKASSMEVPRTGRIRKLSTRLERRERVFPV-----GDHASTSIPETVP 1146
            ++  +T GH     A ++E  + GR+R L    E+R R         G    T     V 
Sbjct: 549  EENCETRGHKINRDAPTIESQKGGRMRSLMINWEKRGRSSSYEGPTSGTSTGTGSVVNVL 608

Query: 1145 PLRHY-------SSYPGAVAGSEEDAIHDLMEQHDQFILSMHSRLAKLQAVHKYWQRHDI 987
            PL  +       S     V+  +ED I DLMEQHDQF+ SM SR AKLQ V++YW+R+D+
Sbjct: 609  PLNMFKQRGRTPSIEKETVSAFDEDVIADLMEQHDQFVSSMQSRSAKLQVVYRYWERNDV 668

Query: 986  RGALSAMEKLADHAVLADVLGLLMDKMDTVTLEICTSXXXXXXXXLESDMDRHQDISLEM 807
            +GA+ AMEK+ADHAVL+DV+ ++ DK+D VTL+ICT         LESDMDRH  ISL+M
Sbjct: 669  KGAIGAMEKMADHAVLSDVISIVADKIDIVTLDICTCLLPLLTNMLESDMDRHLSISLDM 728

Query: 806  LLKLVKVFGQVIYYSLSAPSSVGVDIEAEQRFERCNLCFIELEKVKRHLPDLSRKGGSIA 627
            LLKLV++FG +IY +LSA +SVGVDIEAEQR ERCN+CF+ELEKVKR L  L+RKGGS+A
Sbjct: 729  LLKLVRMFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVA 788

Query: 626  KSAQELNLVLQEVS 585
            K A ELNL LQEVS
Sbjct: 789  KFAHELNLALQEVS 802


>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
          Length = 989

 Score =  233 bits (594), Expect = 9e-59
 Identities = 123/202 (60%), Positives = 150/202 (74%), Gaps = 5/202 (2%)
 Frame = -3

Query: 1178 HASTSIPETVPPLRHYSSYPG-----AVAGSEEDAIHDLMEQHDQFILSMHSRLAKLQAV 1014
            HA       VP  + Y  Y       AV  S+EDAI D+MEQH QF+ S+ SRL+KLQ V
Sbjct: 787  HAPNYSTFLVPLPQFYRGYTPSTEKEAVPASDEDAITDIMEQHGQFVGSIQSRLSKLQVV 846

Query: 1013 HKYWQRHDIRGALSAMEKLADHAVLADVLGLLMDKMDTVTLEICTSXXXXXXXXLESDMD 834
            H++W+R+DI+GA+ AMEK+ADH+V ADV+ +L +K D VTLEICTS        LES+MD
Sbjct: 847  HRFWERNDIKGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESEMD 906

Query: 833  RHQDISLEMLLKLVKVFGQVIYYSLSAPSSVGVDIEAEQRFERCNLCFIELEKVKRHLPD 654
            RH  ISLEMLLKLV++FG VI+ +LSA SSVGVDI+AEQR ERCNLCFIELEK+K  LP 
Sbjct: 907  RHLGISLEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCLPA 966

Query: 653  LSRKGGSIAKSAQELNLVLQEV 588
            L+R+GGS+AK AQELNL L EV
Sbjct: 967  LTRRGGSVAKLAQELNLALLEV 988


Top