BLASTX nr result

ID: Lithospermum22_contig00029369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029369
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         235   3e-60
ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   231   5e-59
emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]   228   5e-58
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...   226   1e-57
ref|XP_002301908.1| glutamate-gated kainate-type ion channel rec...   224   7e-57

>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  235 bits (599), Expect = 3e-60
 Identities = 109/150 (72%), Positives = 137/150 (91%)
 Frame = -2

Query: 452 PSVVTLGAIFSFDSPIGKVAKIAIEEAVKDVNANSTVLKGTKLVVNMHDSNCSGFVGMLG 273
           P+VV++GAIF+FDS IG+ AKIAI+EAVKDVN+NS++L+GTKLVV + +SNCSGF+GM+G
Sbjct: 34  PAVVSVGAIFTFDSTIGRAAKIAIQEAVKDVNSNSSILQGTKLVVQLQNSNCSGFLGMVG 93

Query: 272 AMQFMETDAVAIIGPQSSVVAHTLSFVTNELQVPLLSYAATDPTLSSLQFPYFVRTTQSD 93
           A++FMETD VA+IGPQSSVVAHT+S V NELQVP LS+AATDPTLSSLQFPYF+RTTQSD
Sbjct: 94  ALKFMETDVVAVIGPQSSVVAHTISHVANELQVPFLSFAATDPTLSSLQFPYFLRTTQSD 153

Query: 92  LYQMKAIADIVYHYGWKKIVVLYLDDDYGR 3
           LYQM AIA+I+  Y WK+++ +++DDDYGR
Sbjct: 154 LYQMTAIAEIIEFYAWKEVIAIFIDDDYGR 183


>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
           gi|297745576|emb|CBI40741.3| unnamed protein product
           [Vitis vinifera]
          Length = 934

 Score =  231 bits (589), Expect = 5e-59
 Identities = 107/150 (71%), Positives = 135/150 (90%)
 Frame = -2

Query: 452 PSVVTLGAIFSFDSPIGKVAKIAIEEAVKDVNANSTVLKGTKLVVNMHDSNCSGFVGMLG 273
           P+VV +GA+F+F+S IG+VAKIAIEEAVKDVN+++ VL GTK V+ M +SNCSGF+GM+G
Sbjct: 29  PAVVNVGAVFTFESTIGRVAKIAIEEAVKDVNSDAGVLTGTKFVLTMRNSNCSGFIGMIG 88

Query: 272 AMQFMETDAVAIIGPQSSVVAHTLSFVTNELQVPLLSYAATDPTLSSLQFPYFVRTTQSD 93
           A+QFMET+ +AIIGPQSSVVAH +S V NELQVPLLS+AATDPTLSSLQFP+FVRTTQSD
Sbjct: 89  ALQFMETETIAIIGPQSSVVAHMISHVANELQVPLLSFAATDPTLSSLQFPFFVRTTQSD 148

Query: 92  LYQMKAIADIVYHYGWKKIVVLYLDDDYGR 3
           LYQMKAI ++V +YGW+ ++ +++DDDYGR
Sbjct: 149 LYQMKAITELVDYYGWRSVIAIFIDDDYGR 178


>emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]
          Length = 916

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/148 (70%), Positives = 133/148 (89%)
 Frame = -2

Query: 446 VVTLGAIFSFDSPIGKVAKIAIEEAVKDVNANSTVLKGTKLVVNMHDSNCSGFVGMLGAM 267
           +V +GA+F+F+S IG+VAKIAIEEAVKDVN+++ VL GTK V+ M +SNCSGF+GM+GA+
Sbjct: 13  IVNVGAVFTFESTIGRVAKIAIEEAVKDVNSDAGVLTGTKFVLTMRNSNCSGFIGMIGAL 72

Query: 266 QFMETDAVAIIGPQSSVVAHTLSFVTNELQVPLLSYAATDPTLSSLQFPYFVRTTQSDLY 87
           QFMET+ +AIIGPQSSVVAH +S V NELQVPLLS+AATDPTLSSLQFP+FVRTTQSDLY
Sbjct: 73  QFMETETIAIIGPQSSVVAHMISHVANELQVPLLSFAATDPTLSSLQFPFFVRTTQSDLY 132

Query: 86  QMKAIADIVYHYGWKKIVVLYLDDDYGR 3
           QMKAI ++V +YGW+ ++ +++DDDYGR
Sbjct: 133 QMKAITELVDYYGWRSVIAIFIDDDYGR 160


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 927

 Score =  226 bits (577), Expect = 1e-57
 Identities = 106/150 (70%), Positives = 135/150 (90%)
 Frame = -2

Query: 452 PSVVTLGAIFSFDSPIGKVAKIAIEEAVKDVNANSTVLKGTKLVVNMHDSNCSGFVGMLG 273
           P+VV++GAIF+ DS IG+VAK+AIEEAVKDVNANS++L GT+L +++ +SNCSGF GM+ 
Sbjct: 29  PAVVSIGAIFTLDSTIGRVAKVAIEEAVKDVNANSSILHGTRLALHIQNSNCSGFSGMVE 88

Query: 272 AMQFMETDAVAIIGPQSSVVAHTLSFVTNELQVPLLSYAATDPTLSSLQFPYFVRTTQSD 93
           A++FMETD VAI+GPQSSVVAHT+S V NELQVPLLS+AATDPTL+SLQFP+FVRTTQSD
Sbjct: 89  ALRFMETDVVAILGPQSSVVAHTISHVVNELQVPLLSFAATDPTLTSLQFPFFVRTTQSD 148

Query: 92  LYQMKAIADIVYHYGWKKIVVLYLDDDYGR 3
           LYQM AIA+IV HY WK+++ +++DD +GR
Sbjct: 149 LYQMAAIAEIVDHYSWKQVIAIFIDDHFGR 178


>ref|XP_002301908.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843634|gb|EEE81181.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 859

 Score =  224 bits (570), Expect = 7e-57
 Identities = 105/150 (70%), Positives = 136/150 (90%)
 Frame = -2

Query: 452 PSVVTLGAIFSFDSPIGKVAKIAIEEAVKDVNANSTVLKGTKLVVNMHDSNCSGFVGMLG 273
           P+VV +GA+F+F+S IG+VAKIAI+EAVKDVNANS++L+GTKL V+M +SNCSGF+GM+ 
Sbjct: 21  PAVVNIGALFTFESSIGRVAKIAIQEAVKDVNANSSILRGTKLNVDMRNSNCSGFLGMVE 80

Query: 272 AMQFMETDAVAIIGPQSSVVAHTLSFVTNELQVPLLSYAATDPTLSSLQFPYFVRTTQSD 93
           A++FMETD VAIIGPQSSVVA  +S VTN+LQVPLLS+AATDP+L+SLQFP+FV+TT SD
Sbjct: 81  ALRFMETDIVAIIGPQSSVVARIISHVTNQLQVPLLSFAATDPSLNSLQFPFFVQTTHSD 140

Query: 92  LYQMKAIADIVYHYGWKKIVVLYLDDDYGR 3
           L+QM AI+D+V +YGWK++  +Y+DDDYGR
Sbjct: 141 LHQMAAISDVVDYYGWKQVTAIYIDDDYGR 170


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