BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029338
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   164   9e-39
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   159   2e-37
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   156   1e-36
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   156   2e-36

>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  164 bits (414), Expect = 9e-39
 Identities = 75/97 (77%), Positives = 84/97 (86%)
 Frame = -2

Query: 291 FSLATRQEICKSSISDCPISHASQFSNPFLGLPLEGGGKCESCGTAEPGQCEGHFGYIEL 112
           F LATRQEIC +S+SDCPISHASQ +NPFLGLPLE G KCESCGTAEPGQCEGHFGYIEL
Sbjct: 18  FGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFG-KCESCGTAEPGQCEGHFGYIEL 76

Query: 111 PIPIYHPDHISELKRLLDLICLKCLKMKNRKIPAKNI 1
           PIPIYHP H+SELKR+L L+CLKCLK++  K+    I
Sbjct: 77  PIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGI 113


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/92 (80%), Positives = 83/92 (90%)
 Frame = -2

Query: 291 FSLATRQEICKSSISDCPISHASQFSNPFLGLPLEGGGKCESCGTAEPGQCEGHFGYIEL 112
           F LATRQEIC +S+SDCPISHASQ +NPFLGLPLE G KCESCGTAEPGQCEGHFGYIEL
Sbjct: 18  FGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFG-KCESCGTAEPGQCEGHFGYIEL 76

Query: 111 PIPIYHPDHISELKRLLDLICLKCLKMKNRKI 16
           PIPIYHP H+SELKR+L L+CLKCLK++  K+
Sbjct: 77  PIPIYHPGHVSELKRMLSLLCLKCLKIRKSKV 108


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 924

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/96 (76%), Positives = 84/96 (87%)
 Frame = -2

Query: 291 FSLATRQEICKSSISDCPISHASQFSNPFLGLPLEGGGKCESCGTAEPGQCEGHFGYIEL 112
           F LAT++EIC +SISDCPISH+SQ +NPFLGLPLE G KCESCGT+EPG+CEGHFG+I L
Sbjct: 19  FGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFG-KCESCGTSEPGKCEGHFGFIHL 77

Query: 111 PIPIYHPDHISELKRLLDLICLKCLKMKNRKIPAKN 4
           PIPIYHP HISELKR+L LICLKCLK+K  KI  K+
Sbjct: 78  PIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKS 113


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = -2

Query: 291 FSLATRQEICKSSISDCPISHASQFSNPFLGLPLEGGGKCESCGTAEPGQCEGHFGYIEL 112
           FSLA  QEIC ++ISDCPI+HASQ SNPFLGLP+E G KCESCGT+EPG+CEGHFGYIEL
Sbjct: 20  FSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFG-KCESCGTSEPGKCEGHFGYIEL 78

Query: 111 PIPIYHPDHISELKRLLDLICLKCLKMKNRK 19
           PIPIYHP+HI+ELK++L L+CLKCLKMK  K
Sbjct: 79  PIPIYHPNHITELKKMLSLLCLKCLKMKKTK 109


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  156 bits (394), Expect = 2e-36
 Identities = 70/97 (72%), Positives = 83/97 (85%)
 Frame = -2

Query: 291 FSLATRQEICKSSISDCPISHASQFSNPFLGLPLEGGGKCESCGTAEPGQCEGHFGYIEL 112
           F LAT +EI  +S+SDCPISH+SQ +NPFLGLPLE G KCESCGT+EPG+CEGHFGYIEL
Sbjct: 21  FGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFG-KCESCGTSEPGKCEGHFGYIEL 79

Query: 111 PIPIYHPDHISELKRLLDLICLKCLKMKNRKIPAKNI 1
           PIPIYHP H+SELKR+L L+CLKCLK+K  KI +  +
Sbjct: 80  PIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSSGV 116