BLASTX nr result

ID: Lithospermum22_contig00029331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029331
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF46150.1| reverse transcriptase [Eleocharis xyridiformis]         83   8e-33
gb|ADF46123.1| reverse transcriptase [Eleocharis palustris var. ...    83   8e-33
gb|ADF46117.1| reverse transcriptase [Eleocharis uniglumis]            84   8e-33
gb|ADF46134.1| reverse transcriptase [Eleocharis palustris subsp...    86   1e-32
gb|ADF46051.1| reverse transcriptase [Eleocharis mamillata]            86   3e-32

>gb|ADF46150.1| reverse transcriptase [Eleocharis xyridiformis]
          Length = 143

 Score = 83.2 bits (204), Expect(2) = 8e-33
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = +1

Query: 160 FQNSPRHYEFLVIPFGLSNAPVTFQSIMNCVFSHFVRQFVLVFFDAILIYSNDIQTHLT* 339
           F+    HYE+LV+PFGLSNAP TFQ++MN +   ++R+FVLVFFD ILIYS D+ THLT 
Sbjct: 60  FRTHQGHYEYLVMPFGLSNAPATFQALMNQILQPYLRKFVLVFFDDILIYSPDLTTHLTH 119

Query: 340 LHK 348
           L K
Sbjct: 120 LTK 122



 Score = 82.4 bits (202), Expect(2) = 8e-33
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = +2

Query: 2   RHLNELIIKHDFPISLVDYLLDELHSTTIFSKLDLRSGYYQIRMDKADIHKTAFKTHQG 178
           R LN L IK+ +PI +++ LLDELH   IFSK+DL+SGY+QIRM   D+HKTAF+THQG
Sbjct: 7   RKLNSLTIKNKYPIPIINDLLDELHGAAIFSKIDLKSGYHQIRMLPTDVHKTAFRTHQG 65


>gb|ADF46123.1| reverse transcriptase [Eleocharis palustris var. vigens]
          Length = 143

 Score = 83.2 bits (204), Expect(2) = 8e-33
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = +1

Query: 160 FQNSPRHYEFLVIPFGLSNAPVTFQSIMNCVFSHFVRQFVLVFFDAILIYSNDIQTHLT* 339
           F+    HYE+LV+PFGLSNAP TFQ++MN +   ++R+FVLVFFD ILIYS D+ THLT 
Sbjct: 60  FRTHQGHYEYLVMPFGLSNAPATFQALMNQILQPYLRKFVLVFFDDILIYSPDLTTHLTH 119

Query: 340 LHK 348
           L K
Sbjct: 120 LTK 122



 Score = 82.4 bits (202), Expect(2) = 8e-33
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = +2

Query: 2   RHLNELIIKHDFPISLVDYLLDELHSTTIFSKLDLRSGYYQIRMDKADIHKTAFKTHQG 178
           R LN L IK+ +PI +++ LLDELH   IFSK+DL+SGY+QIRM   D+HKTAF+THQG
Sbjct: 7   RKLNSLTIKNKYPIPIINDLLDELHGAAIFSKIDLKSGYHQIRMLPTDVHKTAFRTHQG 65


>gb|ADF46117.1| reverse transcriptase [Eleocharis uniglumis]
          Length = 143

 Score = 84.0 bits (206), Expect(2) = 8e-33
 Identities = 37/59 (62%), Positives = 48/59 (81%)
 Frame = +2

Query: 2   RHLNELIIKHDFPISLVDYLLDELHSTTIFSKLDLRSGYYQIRMDKADIHKTAFKTHQG 178
           R LN + IK+ +PI ++D LL+ELH   IFSK+DLRSGY+QIRM  AD+HKTAF+TH+G
Sbjct: 7   RKLNSMTIKNKYPIPIIDDLLNELHGAAIFSKVDLRSGYHQIRMHPADVHKTAFRTHEG 65



 Score = 81.6 bits (200), Expect(2) = 8e-33
 Identities = 36/58 (62%), Positives = 47/58 (81%)
 Frame = +1

Query: 160 FQNSPRHYEFLVIPFGLSNAPVTFQSIMNCVFSHFVRQFVLVFFDAILIYSNDIQTHL 333
           F+    HYE+ V+PFGL+NAP TFQ++MN +F  F+R+FVLVFFD ILIYS D++THL
Sbjct: 60  FRTHEGHYEYQVMPFGLTNAPATFQALMNQIFKSFLRKFVLVFFDDILIYSADLETHL 117


>gb|ADF46134.1| reverse transcriptase [Eleocharis palustris subsp. waltersii]
          Length = 143

 Score = 86.3 bits (212), Expect(2) = 1e-32
 Identities = 38/59 (64%), Positives = 49/59 (83%)
 Frame = +2

Query: 2   RHLNELIIKHDFPISLVDYLLDELHSTTIFSKLDLRSGYYQIRMDKADIHKTAFKTHQG 178
           R LN L +K+ +PI ++D LLDELH +  FSK+DLRSGY+QIRM+K D+HKTAF+THQG
Sbjct: 7   RQLNNLTVKNKYPIPIIDDLLDELHGSKWFSKVDLRSGYHQIRMNKEDVHKTAFRTHQG 65



 Score = 79.0 bits (193), Expect(2) = 1e-32
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +1

Query: 160 FQNSPRHYEFLVIPFGLSNAPVTFQSIMNCVFSHFVRQFVLVFFDAILIYSNDIQTHLT* 339
           F+    H+E+LV+PFGL+NAP TFQ +MN VF  F+R+FVLVFFD ILI+S D+Q H T 
Sbjct: 60  FRTHQGHFEYLVMPFGLTNAPATFQCLMNQVFKLFLRKFVLVFFDDILIFSADLQAHKTH 119

Query: 340 LHK 348
           L +
Sbjct: 120 LQQ 122


>gb|ADF46051.1| reverse transcriptase [Eleocharis mamillata]
          Length = 143

 Score = 86.3 bits (212), Expect(2) = 3e-32
 Identities = 38/59 (64%), Positives = 49/59 (83%)
 Frame = +2

Query: 2   RHLNELIIKHDFPISLVDYLLDELHSTTIFSKLDLRSGYYQIRMDKADIHKTAFKTHQG 178
           R LN L +K+ +PI ++D LLDELH +  FSK+DLRSGY+QIRM+K D+HKTAF+THQG
Sbjct: 7   RQLNNLTVKNKYPIPIIDDLLDELHGSKWFSKVDLRSGYHQIRMNKEDVHKTAFRTHQG 65



 Score = 77.4 bits (189), Expect(2) = 3e-32
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 160 FQNSPRHYEFLVIPFGLSNAPVTFQSIMNCVFSHFVRQFVLVFFDAILIYSNDIQTH 330
           F+    H+E+LV+PFGL+NAP TFQ +MN VF  F+R+FVLVFFD ILI+S D+Q H
Sbjct: 60  FRTHQGHFEYLVMPFGLTNAPATFQCLMNQVFKPFLRKFVLVFFDDILIFSADLQQH 116


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