BLASTX nr result

ID: Lithospermum22_contig00029285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029285
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
emb|CBI39562.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240...    80   1e-13
ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap...    79   3e-13

>ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1|
           predicted protein [Populus trichocarpa]
          Length = 810

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/74 (54%), Positives = 47/74 (63%)
 Frame = -2

Query: 506 HSTFKDIARSSTHTILAICGAEHRQRDVHPVQTSLICHHTEGAGNVQTSQAKGPCFPCFD 327
           H TFKDIARSSTHTILA CG EH++ +VH V     C H +     QTS  +G C  CFD
Sbjct: 728 HDTFKDIARSSTHTILAACGLEHKRSEVHTVPLPSTCTHNDRVVAGQTSVMRGCCSSCFD 787

Query: 326 HFVKSVVSEIMRVR 285
            FV++VV  IM  R
Sbjct: 788 SFVRNVVKRIMDTR 801


>ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/74 (54%), Positives = 46/74 (62%)
 Frame = -2

Query: 506 HSTFKDIARSSTHTILAICGAEHRQRDVHPVQTSLICHHTEGAGNVQTSQAKGPCFPCFD 327
           H TFKDI+RSSTHTILA CG EH++ +VH V     C H +     QTS  KG C  CFD
Sbjct: 653 HDTFKDISRSSTHTILAACGLEHKRSEVHTVPPPSTCIHIDRVVAGQTSPMKGCCSSCFD 712

Query: 326 HFVKSVVSEIMRVR 285
            FV+ VV  IM  R
Sbjct: 713 SFVRDVVKRIMDKR 726


>emb|CBI39562.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 48/75 (64%)
 Frame = -2

Query: 503 STFKDIARSSTHTILAICGAEHRQRDVHPVQTSLICHHTEGAGNVQTSQAKGPCFPCFDH 324
           STFKD+ARSSTHTILA  G EHR+ +VH V T  IC H E   + Q S  K  C  CFD 
Sbjct: 323 STFKDVARSSTHTILAAYGLEHRRSEVHSVPTPPICSHIERIADGQMSLMKSSCSCCFDS 382

Query: 323 FVKSVVSEIMRVRVP 279
           +V+ VV  I+  ++P
Sbjct: 383 YVRDVVRRILNTKLP 397


>ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
          Length = 733

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/75 (52%), Positives = 48/75 (64%)
 Frame = -2

Query: 503 STFKDIARSSTHTILAICGAEHRQRDVHPVQTSLICHHTEGAGNVQTSQAKGPCFPCFDH 324
           STFKD+ARSSTHTILA  G EHR+ +VH V T  IC H E   + Q S  K  C  CFD 
Sbjct: 652 STFKDVARSSTHTILAAYGLEHRRSEVHSVPTPPICSHIERIADGQMSLMKSSCSCCFDS 711

Query: 323 FVKSVVSEIMRVRVP 279
           +V+ VV  I+  ++P
Sbjct: 712 YVRDVVRRILNTKLP 726


>ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
           putative [Ricinus communis] gi|223548440|gb|EEF49931.1|
           splicing factor, arginine/serine-rich 2,rnap interacting
           protein, putative [Ricinus communis]
          Length = 791

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/74 (55%), Positives = 47/74 (63%)
 Frame = -2

Query: 500 TFKDIARSSTHTILAICGAEHRQRDVHPVQTSLICHHTEGAGNVQTSQAKGPCFPCFDHF 321
           TFKDI RSSTHTILA CG EH++ +VH V    IC H +     QTS  KG C  CFD F
Sbjct: 711 TFKDILRSSTHTILAACGLEHKRSEVHFVPPPSICAHGDRLIAGQTSILKGFCSSCFDSF 770

Query: 320 VKSVVSEIMRVRVP 279
           V+ VV  IM  R+P
Sbjct: 771 VRDVVKTIMDTRLP 784


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