BLASTX nr result

ID: Lithospermum22_contig00029282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029282
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             123   2e-26
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   123   2e-26
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   122   2e-26
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   119   3e-25
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             115   3e-24

>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/101 (53%), Positives = 71/101 (70%)
 Frame = -1

Query: 304 VEGWSSKLLSRAGKEVLIKAVLQSISSYYAMQCFRFPATVISELESIEANFWWDSTKEKR 125
           + GWS+K LS+ GKEV+IK+V+  + +Y  M CFR P T+ S+L S  A FWW S  E R
Sbjct: 626 INGWSAKFLSKGGKEVMIKSVVAVLPTY-VMSCFRLPKTITSKLTSAVAKFWWSSDGESR 684

Query: 124 KAHWASWNRLCLTKQDGGMGFRHLKHFNSALLMKQAWRLVS 2
             HW +WN+LC +K DGG+GFR +  FNSALL KQ WRL++
Sbjct: 685 GMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLIT 725


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/99 (58%), Positives = 69/99 (69%)
 Frame = -1

Query: 304 VEGWSSKLLSRAGKEVLIKAVLQSISSYYAMQCFRFPATVISELESIEANFWWDSTKEKR 125
           + GW  K LS AG+EVLIK+V Q+I +Y  M CFR P  V  E+ES+  NFWW   +E R
Sbjct: 25  LNGWKEKSLSVAGREVLIKSVAQAIPTYI-MSCFRLPDGVCXEIESMVCNFWWGQKEETR 83

Query: 124 KAHWASWNRLCLTKQDGGMGFRHLKHFNSALLMKQAWRL 8
           K HW SW +LC +K  GGMGFR L+HFNSALL KQ WRL
Sbjct: 84  KIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRL 122


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/100 (58%), Positives = 69/100 (69%)
 Frame = -1

Query: 304 VEGWSSKLLSRAGKEVLIKAVLQSISSYYAMQCFRFPATVISELESIEANFWWDSTKEKR 125
           + GW  K LS AG+EVLIK+V Q+I +Y  M CFR P  V  E+ES+  NFWW   +E R
Sbjct: 25  LNGWKEKFLSVAGREVLIKSVAQAIPTYI-MSCFRLPDGVCHEIESMVCNFWWXQKEETR 83

Query: 124 KAHWASWNRLCLTKQDGGMGFRHLKHFNSALLMKQAWRLV 5
           K HW SW +LC +K  GGMGFR L+ FNSALL KQ WRLV
Sbjct: 84  KIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLV 123


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = -1

Query: 304 VEGWSSKLLSRAGKEVLIKAVLQSISSYYAMQCFRFPATVISELESIEANFWWDSTKEKR 125
           + GWS+K LS+ GKEV+IK+V  ++  Y  M CFR P  + S+L S  A FWW S  + R
Sbjct: 560 INGWSAKFLSKGGKEVMIKSVAATLPRY-VMSCFRLPKAITSKLTSAVAKFWWSSNGDSR 618

Query: 124 KAHWASWNRLCLTKQDGGMGFRHLKHFNSALLMKQAWRLVS 2
             HW +W++LC +K DGG+GFR++  FNSALL KQ WRL++
Sbjct: 619 GMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLIT 659


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/97 (53%), Positives = 66/97 (68%)
 Frame = -1

Query: 295  WSSKLLSRAGKEVLIKAVLQSISSYYAMQCFRFPATVISELESIEANFWWDSTKEKRKAH 116
            W ++ LS+ GKEVL+K+V  ++   +AM CF+ P T    LES  A+FWWDS    RK H
Sbjct: 742  WFTRCLSQGGKEVLLKSVALAMP-VFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIH 800

Query: 115  WASWNRLCLTKQDGGMGFRHLKHFNSALLMKQAWRLV 5
            W SW RLCL K  GG+GFR ++ FN ALL KQAWRL+
Sbjct: 801  WQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLL 837


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