BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029198
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]                104   7e-21
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   104   7e-21
gb|ABA96411.1| retrotransposon protein, putative, unclassified [...   102   4e-20
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   102   4e-20
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   101   7e-20

>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
          Length = 811

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/103 (49%), Positives = 67/103 (65%)
 Frame = +2

Query: 14   YRATTHAVAELQWLRSVLFEXXXXXXXXXXXXCDNISTTYMAANPVKHARIKHIEIDIHF 193
            YRA  +AVAE+ WLR +L E            CDN+S  Y+++NPV+H R KH+EID+HF
Sbjct: 708  YRAVANAVAEVTWLRQLLQELHSPPSRATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHF 767

Query: 194  VHEFVAKGSLKVSYIPTEH*LADIFTKNLSTPRFKFLCSSLNI 322
            V E VA G+++V ++PT    ADIFTK L TP F    SSLN+
Sbjct: 768  VRERVAVGAVRVLHVPTTSQYADIFTKGLPTPVFTEFRSSLNV 810


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/103 (49%), Positives = 67/103 (65%)
 Frame = +2

Query: 14   YRATTHAVAELQWLRSVLFEXXXXXXXXXXXXCDNISTTYMAANPVKHARIKHIEIDIHF 193
            YRA  +AVAE+ WLR +L E            CDN+S  Y+++NPV+H R KH+EID+HF
Sbjct: 1576 YRAVANAVAEVTWLRQLLQELHSPPSRATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHF 1635

Query: 194  VHEFVAKGSLKVSYIPTEH*LADIFTKNLSTPRFKFLCSSLNI 322
            V E VA G+++V ++PT    ADIFTK L TP F    SSLN+
Sbjct: 1636 VRERVAVGAVRVLHVPTTSQYADIFTKGLPTPVFTEFRSSLNV 1678


>gb|ABA96411.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 256

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/103 (47%), Positives = 66/103 (64%)
 Frame = +2

Query: 14  YRATTHAVAELQWLRSVLFEXXXXXXXXXXXXCDNISTTYMAANPVKHARIKHIEIDIHF 193
           YRA  +AVAE  WLR +L E            CDN+S  Y+++NPV+H R KH+EID+HF
Sbjct: 143 YRAVANAVAEASWLRQLLHEFHSPPSKATLVYCDNVSAIYLSSNPVQHQRTKHVEIDLHF 202

Query: 194 VHEFVAKGSLKVSYIPTEH*LADIFTKNLSTPRFKFLCSSLNI 322
           V + VA G+++V ++PT    ADIFTK L +P F    SSLN+
Sbjct: 203 VRDKVALGAVRVLHVPTSSQYADIFTKGLPSPVFVEFRSSLNV 245


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 976

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/103 (46%), Positives = 65/103 (63%)
 Frame = +2

Query: 14   YRATTHAVAELQWLRSVLFEXXXXXXXXXXXXCDNISTTYMAANPVKHARIKHIEIDIHF 193
            YRA  +AVAE  WLR +L E            CDN+S  Y++ NPV+H R KH+EID+HF
Sbjct: 863  YRAVANAVAETSWLRQLLHELYAPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHF 922

Query: 194  VHEFVAKGSLKVSYIPTEH*LADIFTKNLSTPRFKFLCSSLNI 322
            VHE V  G+++V ++PT    A++FTK L +P F    SSLN+
Sbjct: 923  VHERVDVGAVRVLHVPTTSQYANVFTKGLPSPVFNEFRSSLNV 965


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
            gi|255676152|dbj|BAH93014.1| Os05g0235100, partial [Oryza
            sativa Japonica Group]
          Length = 841

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/101 (51%), Positives = 60/101 (59%)
 Frame = +2

Query: 14   YRATTHAVAELQWLRSVLFEXXXXXXXXXXXXCDNISTTYMAANPVKHARIKHIEIDIHF 193
            YRA  HA+AE  WLR +L E            CDN+S  YMAANPV H R KHIEIDIHF
Sbjct: 728  YRAVAHAIAECCWLRQLLSELHISLTSATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHF 787

Query: 194  VHEFVAKGSLKVSYIPTEH*LADIFTKNLSTPRFKFLCSSL 316
            V E VA G ++V ++P+ H  ADI TK L    F    SSL
Sbjct: 788  VREKVALGQVRVLHLPSSHQFADIMTKGLPVQLFTEFRSSL 828