BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029192
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    55   2e-15
gb|AAX95666.1| Reverse transcriptase (RNA-dependent DNA polymera...    60   7e-15
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      60   9e-15
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...    59   1e-14
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...    56   1e-14

>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score = 55.1 bits (131), Expect(2) = 2e-15
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 1    TFSLVIKTATIHTILSVAVSFSWPLRQIDIQNAFLHGTL 117
            TFS V+K ATI  +LS+AVS  W +RQ+D+QNAFLHG L
Sbjct: 1019 TFSPVVKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFL 1057



 Score = 51.6 bits (122), Expect(2) = 2e-15
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +2

Query: 113  LYMVQPPGFIDERYPGYVCKLHKSLYGLK 199
            +YM QPPG+ DE +PGYVCKL K+LYGLK
Sbjct: 1061 VYMKQPPGYEDESFPGYVCKLDKALYGLK 1089


>gb|AAX95666.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
           [Oryza sativa Japonica Group]
           gi|108710700|gb|ABF98495.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 757

 Score = 59.7 bits (143), Expect(2) = 7e-15
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   TFSLVIKTATIHTILSVAVSFSWPLRQIDIQNAFLHGTL 117
           TFSLV+K ATI  ILS+AVS  W LRQ+D+QNAFLHG L
Sbjct: 417 TFSLVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGHL 455



 Score = 45.4 bits (106), Expect(2) = 7e-15
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +2

Query: 113 LYMVQPPGFIDERYPGYVCKLHKSLYGLK 199
           +YM QPPGF D   P Y+CKL KSLYGLK
Sbjct: 459 VYMDQPPGFEDVTKPHYICKLDKSLYGLK 487


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 59.7 bits (143), Expect(2) = 9e-15
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +1

Query: 1    TFSLVIKTATIHTILSVAVSFSWPLRQIDIQNAFLHGTL 117
            TFS V+K ATI TILSVAVS  W LRQ+D+QNAFLHG L
Sbjct: 897  TFSPVVKAATIRTILSVAVSRGWSLRQLDVQNAFLHGYL 935



 Score = 45.1 bits (105), Expect(2) = 9e-15
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +2

Query: 113  LYMVQPPGFIDERYPGYVCKLHKSLYGLK 199
            +YM QPPG+ D   P Y+CKL K+LYGLK
Sbjct: 939  VYMRQPPGYEDRNKPNYICKLDKALYGLK 967


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score = 58.9 bits (141), Expect(2) = 1e-14
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +1

Query: 1    TFSLVIKTATIHTILSVAVSFSWPLRQIDIQNAFLHGTL 117
            TFS V+K AT+ T+LS+AVS  WP+ Q+D++NAFLHGTL
Sbjct: 1163 TFSPVVKPATVRTVLSLAVSRDWPIHQLDVKNAFLHGTL 1201



 Score = 45.4 bits (106), Expect(2) = 1e-14
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +2

Query: 113  LYMVQPPGFIDERYPGYVCKLHKSLYGLK 199
            +Y +QPPGF+D   P  VC+L+KSLYGLK
Sbjct: 1205 VYCIQPPGFVDPTRPDMVCRLNKSLYGLK 1233


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score = 56.2 bits (134), Expect(2) = 1e-14
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   TFSLVIKTATIHTILSVAVSFSWPLRQIDIQNAFLHGTL 117
           TFS V+K ATI  ILS+AVS  W +RQ+D+QNAFLHG L
Sbjct: 819 TFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVL 857



 Score = 48.1 bits (113), Expect(2) = 1e-14
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +2

Query: 113 LYMVQPPGFIDERYPGYVCKLHKSLYGLK 199
           +YM QPPG+ D   PGYVCKL K+LYGLK
Sbjct: 861 VYMKQPPGYEDSSLPGYVCKLDKALYGLK 889