BLASTX nr result
ID: Lithospermum22_contig00029173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00029173
(278 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera] 127 1e-27
ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containi... 110 9e-23
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ... 108 4e-22
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,... 104 8e-21
>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 127 bits (318), Expect = 1e-27
Identities = 59/92 (64%), Positives = 75/92 (81%)
Frame = -1
Query: 278 GQVDEARLLLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNII 99
G+VDEAR+LLNKVPNPNV+LFNTL+NGY+ GR ++A AV+ E+MLS GC PD++TYN +
Sbjct: 354 GKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTL 413
Query: 98 IQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
I GLCKKG L SAR +++EM EPNV+TY
Sbjct: 414 ILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = -1
Query: 254 LLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNIIIQGLCKKG 75
+++K NPN I N L+NG R G + A+ +++ M+ RG PD+ TYN +I GLCK G
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD-MIHRGLTPDIVTYNSLINGLCKTG 666
Query: 74 CLSSARRVLSEMSGTVNEPNVVTY 3
A + ++ P+ +TY
Sbjct: 667 RAQEALNLFDKLQVEGICPDAITY 690
Score = 56.2 bits (134), Expect = 3e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = -1
Query: 275 QVDEARLLLNKVPN----PNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTY 108
+VD A LL + PN I++ TL++ +VGR + + +++E ML GC PDV T+
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE-MLLMGCIPDVNTF 308
Query: 107 NIIIQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
N I GLCK + A +++ M PN TY
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY 343
>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 127 bits (318), Expect = 1e-27
Identities = 59/92 (64%), Positives = 75/92 (81%)
Frame = -1
Query: 278 GQVDEARLLLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNII 99
G+VDEAR+LLNKVPNPNV+LFNTL+NGY+ GR ++A AV+ E+MLS GC PD++TYN +
Sbjct: 336 GKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTL 395
Query: 98 IQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
I GLCKKG L SAR +++EM EPNV+TY
Sbjct: 396 ILGLCKKGYLVSARELMNEMQIKGCEPNVITY 427
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = -1
Query: 254 LLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNIIIQGLCKKG 75
+++K NPN I N L+NG R G + A+ +++ M+ RG PD+ TYN +I GLCK G
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD-MIHRGLTPDIVTYNSLINGLCKTG 648
Query: 74 CLSSARRVLSEMSGTVNEPNVVTY 3
A + ++ P+ +TY
Sbjct: 649 RAQEALNLFDKLQVEGICPDAITY 672
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = -1
Query: 275 QVDEARLLLNKVPN----PNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTY 108
+VD A LL + PN I++ TL++ +VGR + + +++E ML GC PDV T+
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE-MLLMGCIPDVNTF 290
Query: 107 NIIIQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
N I GLCK + A +++ M PN TY
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTY 325
>ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 110 bits (276), Expect = 9e-23
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = -1
Query: 278 GQVDEARLLLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNII 99
GQVDEAR LLNK+PNPN +L+NTL++GY+ GRFE+A ++ M+ G +PD YT+NI+
Sbjct: 324 GQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIM 383
Query: 98 IQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
I GL KKG L SA +L+EM EPNV+TY
Sbjct: 384 IDGLVKKGYLVSALELLNEMVAKRFEPNVITY 415
Score = 60.8 bits (146), Expect = 1e-07
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = -1
Query: 254 LLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNIIIQGLCKKG 75
+L K P +I N L++G R G+ DA+ +++ M+ RG PD+ TYN +I GLCK G
Sbjct: 578 MLGKGIFPTIISCNILISGLCRTGKVNDALKFLQD-MIHRGLTPDIVTYNSLINGLCKMG 636
Query: 74 CLSSARRVLSEMSGTVNEPNVVTY 3
+ A + +++ P+ +TY
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITY 660
>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor
[Medicago truncatula]
Length = 948
Score = 108 bits (270), Expect = 4e-22
Identities = 50/92 (54%), Positives = 68/92 (73%)
Frame = -1
Query: 278 GQVDEARLLLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNII 99
G+VDEAR +L+K+PNPN +L+NTL+NGY+ GRFE+A ++ + M+ G +PD +T+NI+
Sbjct: 319 GKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378
Query: 98 IQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
I GLCKKG L SA L EM EPNV+TY
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITY 410
Score = 58.2 bits (139), Expect = 7e-07
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -1
Query: 233 PNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNIIIQGLCKKGCLSSARR 54
P++ N L+N + R G+ DA+ +++ M+ RG PD+ TYN +I GLCK G A
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRD-MIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 53 VLSEMSGTVNEPNVVTY 3
+ + + P+ VTY
Sbjct: 639 LFNGLQAKGIHPDAVTY 655
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Frame = -1
Query: 278 GQVDEARLLLNKVP----NPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYT 111
G +EA ++N + + N + +N L+ + G+ +DA+ + E M S+GC+PD+YT
Sbjct: 421 GHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-MSSKGCKPDIYT 479
Query: 110 YNIIIQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
+N +I GLCK + A + +M N VTY
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515
>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 774
Score = 104 bits (259), Expect = 8e-21
Identities = 45/92 (48%), Positives = 68/92 (73%)
Frame = -1
Query: 278 GQVDEARLLLNKVPNPNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNII 99
G+VDEA++LLNKVP PN + F L+NGY++ GR ++A A + + M+ GC+PDV+T+N +
Sbjct: 327 GKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTL 386
Query: 98 IQGLCKKGCLSSARRVLSEMSGTVNEPNVVTY 3
I GLCKKG + SA ++++MS PN++TY
Sbjct: 387 IHGLCKKGLMGSAVDMVNDMSANGCTPNLITY 418
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -1
Query: 233 PNVILFNTLVNGYIRVGRFEDAMAVVKETMLSRGCQPDVYTYNIIIQGLCKKGCLSSARR 54
P+ I N L+NG RVG+ +A+ ++++ M+ RG PDV TYN +I GLCK G + A
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRD-MIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646
Query: 53 VLSEMSGTVNEPNVVTY 3
+ +++ +P+ +TY
Sbjct: 647 LFNKLQAEGIQPDAITY 663