BLASTX nr result

ID: Lithospermum22_contig00029141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029141
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95830.1| unknown [Populus trichocarpa]                          179   3e-43
ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   163   2e-38
ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like ...   159   3e-37
ref|XP_002525361.1| polygalacturonase, putative [Ricinus communi...   152   3e-35

>gb|ABK95830.1| unknown [Populus trichocarpa]
          Length = 516

 Score =  179 bits (454), Expect = 3e-43
 Identities = 99/192 (51%), Positives = 114/192 (59%), Gaps = 5/192 (2%)
 Frame = -1

Query: 562 IINMSGISFRSLTFTFIVAFLVWSSNTETCNARRGKNWRESRSTSAS-----GKSRNNKN 398
           ++NMSG+SFR LTF   +AFLVWSS+  TC ARRGK+WRESR  SAS     GK++ N  
Sbjct: 1   MVNMSGLSFRCLTFMLFIAFLVWSSSFHTCIARRGKHWRESRGNSASLAKKKGKNQGNSR 60

Query: 397 QNVHGXXXXXXXXXXXXXXXXXXXXXXKHGVPAVSPPSGGFRHVPSTTIYNVLDFGAKGN 218
           Q  H                           PA SPP        S+T +NVLDFGAKGN
Sbjct: 61  QKHHNGVSKPKPPPPKAPSLPPPPKDD---APAPSPPQ------KSSTTFNVLDFGAKGN 111

Query: 217 GGTDDTXXXXXXXXXXXXXXASTIIVPAKYTFLVGPISFSGPNCQHNIVFQLDGTVIAPT 38
           G +DDT              AST+IVPA+Y FLVGPISFSGP CQ NIVFQLDGT+IAPT
Sbjct: 112 GKSDDTKAFQAAWAEACKVAASTMIVPAEYVFLVGPISFSGPYCQANIVFQLDGTIIAPT 171

Query: 37  NAKAWSSGLFQW 2
           N+  W  GLFQW
Sbjct: 172 NSNVWGRGLFQW 183


>ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|222851593|gb|EEE89140.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  170 bits (430), Expect = 2e-40
 Identities = 95/192 (49%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
 Frame = -1

Query: 562 IINMSGISFRSLTFTFIVAFLVWSSNTETCNARRGKNWRESRSTSAS-----GKSRNNKN 398
           ++NM G SFRSL F   + FLVWS++ +TC ARRGK+WR+SRS  AS     GKS  N +
Sbjct: 1   MVNMRGFSFRSLAFMLFIVFLVWSASFDTCIARRGKHWRQSRSNPASLAKKKGKSHGNSH 60

Query: 397 QNVHGXXXXXXXXXXXXXXXXXXXXXXKHGVPAVSPPSGGFRHVPSTTIYNVLDFGAKGN 218
              H                       K   P  SPP  G      +T +NVLDFGAKGN
Sbjct: 61  HQHHSGVSKPKAPPHKAPALPPPAPKEK--APKPSPPQKG------STTFNVLDFGAKGN 112

Query: 217 GGTDDTXXXXXXXXXXXXXXASTIIVPAKYTFLVGPISFSGPNCQHNIVFQLDGTVIAPT 38
           G +DDT              AST+IVPA+Y FLVGPISFSGP CQ NIVFQLDGT+IAP+
Sbjct: 113 GKSDDTKAFQAAWAAACKVEASTLIVPAEYVFLVGPISFSGPYCQANIVFQLDGTIIAPS 172

Query: 37  NAKAWSSGLFQW 2
           NA AW  GL QW
Sbjct: 173 NANAWGRGLLQW 184


>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|297739064|emb|CBI28553.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  163 bits (412), Expect = 2e-38
 Identities = 93/188 (49%), Positives = 109/188 (57%), Gaps = 4/188 (2%)
 Frame = -1

Query: 553 MSGISFRSLTFTFIVAFLVWSSNTETCNARRGKNWRESRSTSASGKSRNNKNQNVHGXXX 374
           MSG+SFR L F  + AFLVWSS+T TC+ARRGK+WR SR+ SAS   +  K+   HG   
Sbjct: 1   MSGLSFRRLAFMLLFAFLVWSSSTGTCHARRGKHWRHSRAASASLSKKKAKS---HGSGS 57

Query: 373 XXXXXXXXXXXXXXXXXXXKHGVPAVSPPSGGFRHVP----STTIYNVLDFGAKGNGGTD 206
                                   A SPP       P     +  +NVLDFGAKG+G TD
Sbjct: 58  HHHGGSKSKPK-------------APSPPKQEVTPPPPEKKGSETFNVLDFGAKGDGDTD 104

Query: 205 DTXXXXXXXXXXXXXXASTIIVPAKYTFLVGPISFSGPNCQHNIVFQLDGTVIAPTNAKA 26
           DT              ASTI+VP++Y FLVGPISFSGP C+ NIVFQLDGT+IAPTNAKA
Sbjct: 105 DTKAFQSAWASACKVEASTIVVPSEYVFLVGPISFSGPYCEANIVFQLDGTIIAPTNAKA 164

Query: 25  WSSGLFQW 2
           W SGL  W
Sbjct: 165 WGSGLLWW 172


>ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 538

 Score =  159 bits (402), Expect = 3e-37
 Identities = 88/204 (43%), Positives = 110/204 (53%), Gaps = 20/204 (9%)
 Frame = -1

Query: 553 MSGISFRSLTFTFIVAFLVWSSNTETCNARRGKNWRESRSTSAS-----GKSRNNKNQNV 389
           MSG+SFR  T+  ++AFL+WS N E C ARRGK+WR+SR  SAS     GK+  N +   
Sbjct: 1   MSGLSFRGFTYMLLIAFLIWSFNFEACIARRGKHWRQSRDVSASVYKKKGKNYGNAHNKY 60

Query: 388 HGXXXXXXXXXXXXXXXXXXXXXXKH----GVPAVSPPSGGFRHVP-----------STT 254
           HG                      +H      P  +PPS      P           S T
Sbjct: 61  HGGGSKSKPPSSHKGTPTLPKPPPQHKNTPSPPYPTPPSDDTPTTPPPKAYNGGGHSSAT 120

Query: 253 IYNVLDFGAKGNGGTDDTXXXXXXXXXXXXXXASTIIVPAKYTFLVGPISFSGPNCQHNI 74
            +NVLDFGAKG+G +DDT              +ST++VPA Y F VGPISFSGP C+ +I
Sbjct: 121 TFNVLDFGAKGDGKSDDTKAFQEAWAEACKIESSTMLVPADYAFFVGPISFSGPYCKPSI 180

Query: 73  VFQLDGTVIAPTNAKAWSSGLFQW 2
           VFQLDGT++APT+ KAW  GL QW
Sbjct: 181 VFQLDGTIVAPTSPKAWGKGLLQW 204


>ref|XP_002525361.1| polygalacturonase, putative [Ricinus communis]
           gi|223535324|gb|EEF36999.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 519

 Score =  152 bits (385), Expect = 3e-35
 Identities = 85/193 (44%), Positives = 106/193 (54%), Gaps = 9/193 (4%)
 Frame = -1

Query: 553 MSGISFRSLTFTFIVAFLVWSSNTETCNARRGKNWRESRSTSASGKSRNNKNQNVHGXXX 374
           M+G+S RSLTF F +AFLVWSS+ ETC ARRG++WR  R TSAS    N +    HG   
Sbjct: 1   MTGVSLRSLTFMFFIAFLVWSSSFETCIARRGRHWRHGRGTSAS--LYNKRKGKSHGSSS 58

Query: 373 XXXXXXXXXXXXXXXXXXXKHGVPAVSP---------PSGGFRHVPSTTIYNVLDFGAKG 221
                               H  P + P         P      +  +  +NVL+FGAKG
Sbjct: 59  NHHQHNKGSKPKPPS-----HKAPLLPPAPTPPKDDAPPSSSSPIKGSATFNVLNFGAKG 113

Query: 220 NGGTDDTXXXXXXXXXXXXXXASTIIVPAKYTFLVGPISFSGPNCQHNIVFQLDGTVIAP 41
           +G TDDT              AST++VPA+Y FLVGP+SFSGP CQ NIVFQL+G +IAP
Sbjct: 114 DGKTDDTKAFQAAWAAACKVEASTMLVPAEYIFLVGPVSFSGPYCQANIVFQLNGKIIAP 173

Query: 40  TNAKAWSSGLFQW 2
           TN+  W+ GL  W
Sbjct: 174 TNSYVWAKGLLWW 186


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