BLASTX nr result

ID: Lithospermum22_contig00029104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029104
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [G...    69   5e-10
ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    67   2e-09
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    64   2e-08
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    64   2e-08
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    57   2e-06

>ref|XP_003527661.1| PREDICTED: transcription factor E2FC-like [Glycine max]
          Length = 473

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 29/85 (34%), Positives = 47/85 (55%)
 Frame = -3

Query: 412 WNMIDNDKCNYCQENETNNHLFFEGHHSSVLWRKLLMYLNELHSPKDWISEARWMVSRGV 233
           + ++ + KCN+C   ET +HL FE      +W ++L +    H PK WI E  W +++G 
Sbjct: 35  FGLLSDTKCNFCDHLETIDHLLFEYAEMKDVWIQILEWQKINHQPKKWIEELSWAMAQGK 94

Query: 232 EKGFKGRLRRLCATTSVYQIWTTRN 158
            KG +  L +   T +VY++W  RN
Sbjct: 95  GKGHRATLLKTALTETVYELWKYRN 119


>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/95 (30%), Positives = 49/95 (51%)
 Frame = -3

Query: 412 WNMIDNDKCNYCQENETNNHLFFEGHHSSVLWRKLLMYLNELHSPKDWISEARWMVSRGV 233
           + ++++ +C +C+E ET  HL FE      +W+K+L +LN  H P  W+ E  W+     
Sbjct: 285 FGIVNDARCAFCEEVETVQHLLFECGEMYAIWKKVLDWLNVDHEPAGWLQELDWIEDTSK 344

Query: 232 EKGFKGRLRRLCATTSVYQIWTTRNRAIFSQEQTS 128
            K +K R  +     +VY+ W  RN  I  +  T+
Sbjct: 345 GKNWKSRFLKTSFVETVYRCWKYRNNKIHEKVDTA 379


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = -3

Query: 412  WNMIDNDKCNYCQ-ENETNNHLFFEGHHSSVLWRKLLMYLNELHSPKDWISEARWMVSRG 236
            + MI +  C+ C   +E+ NHLFF    +  +W  +L +L   H P++W  E  W++   
Sbjct: 1316 FGMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWLGRRHDPREWDMELAWIIENT 1375

Query: 235  VEKGFKGRLRRLCATTSVYQIWTTRNRAIF 146
              KG+K  L ++    +VY +W  RN   F
Sbjct: 1376 KGKGWKSALLKMATAETVYNVWHYRNSMCF 1405


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = -3

Query: 412  WNMIDNDKCNYCQ-ENETNNHLFFEGHHSSVLWRKLLMYLNELHSPKDWISEARWMVSRG 236
            + MI +  C+ C   +E+ NHLFF    +  +W  +L +L   H P++W  E  W++   
Sbjct: 1199 FRMIQSSDCSICNCADESINHLFFNCSGTREIWGNILDWLGRRHDPREWDMELAWIIENT 1258

Query: 235  VEKGFKGRLRRLCATTSVYQIWTTRNRAIF 146
              KG+K  L ++    +VY +W  RN   F
Sbjct: 1259 KGKGWKSALLKMATAETVYNVWHYRNSMCF 1288


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
 Frame = -3

Query: 421  TIVWNMIDNDKCNYCQ-ENETNNHLFFEGHHSSVLWRKLLMYLNELHSPKDWISEARWMV 245
            T  W+      C  CQ E ET +HLF      S++W+++L         ++W     WM+
Sbjct: 1082 TTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMFREWKDIIEWML 1141

Query: 244  SRGVEKGFKGRLRRLCATTSVYQIWTTRNRAIFSQEQTSVAQIVAVCVNNIRD 86
            S   +  F G L++L   T+++ IW  RN  + S    S   I      +IRD
Sbjct: 1142 SN--QGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIRD 1192


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