BLASTX nr result

ID: Lithospermum22_contig00029082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029082
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40800.1| unknown [Medicago truncatula]                           89   4e-16
ref|XP_002277738.1| PREDICTED: upstream activation factor subuni...    86   3e-15
gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]      86   3e-15
ref|XP_004172787.1| PREDICTED: upstream activation factor subuni...    84   1e-14
ref|NP_194411.1| SWIB/MDM2 domain-containing protein [Arabidopsi...    82   4e-14

>gb|AFK40800.1| unknown [Medicago truncatula]
          Length = 100

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = +1

Query: 1   IKENNLQDPNNKNIVCCDEKLKGILLGKPRVDLAELPTLMKLHFPKKQK 147
           IK NNLQDPNNKN+V CDEKLKGILLGKP+VDLAELP L+KLHFPK+ K
Sbjct: 52  IKTNNLQDPNNKNVVNCDEKLKGILLGKPQVDLAELPALIKLHFPKEPK 100


>ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
           vinifera] gi|297737490|emb|CBI26691.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = +1

Query: 1   IKENNLQDPNNKNIVCCDEKLKGILLGKPRVDLAELPTLMKLHFPKKQK 147
           IK NNLQDPNNKN+V CD+KL+ ILLGKPRV+LAELP L+KLHFPK++K
Sbjct: 52  IKANNLQDPNNKNVVICDDKLRSILLGKPRVELAELPALIKLHFPKERK 100


>gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 100

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = +1

Query: 1   IKENNLQDPNNKNIVCCDEKLKGILLGKPRVDLAELPTLMKLHFPKKQK 147
           IKENNLQDPNNKN+V CDEKLK +LLGKP+V+L ELPTL+KLHFPK+ +
Sbjct: 52  IKENNLQDPNNKNLVNCDEKLKSVLLGKPQVELTELPTLIKLHFPKQPR 100


>ref|XP_004172787.1| PREDICTED: upstream activation factor subunit spp27-like [Cucumis
           sativus]
          Length = 100

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = +1

Query: 1   IKENNLQDPNNKNIVCCDEKLKGILLGKPRVDLAELPTLMKLHFPKKQK 147
           IK NNLQDP NKN+V CDEKLK ILLGKP+V+LAELP L+KLHFPK  K
Sbjct: 52  IKTNNLQDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 100


>ref|NP_194411.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|186513923|ref|NP_001119064.1| SWIB/MDM2
           domain-containing protein [Arabidopsis thaliana]
           gi|4455204|emb|CAB36527.1| putative protein [Arabidopsis
           thaliana] gi|7269533|emb|CAB79536.1| putative protein
           [Arabidopsis thaliana] gi|38566544|gb|AAR24162.1|
           At4g26810 [Arabidopsis thaliana]
           gi|40823827|gb|AAR92306.1| At4g26810 [Arabidopsis
           thaliana] gi|332659855|gb|AEE85255.1| SWIB/MDM2
           domain-containing protein [Arabidopsis thaliana]
           gi|332659856|gb|AEE85256.1| SWIB/MDM2 domain-containing
           protein [Arabidopsis thaliana]
          Length = 106

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = +1

Query: 1   IKENNLQDPNNKNIVCCDEKLKGILLGKPRVDLAELPTLMKLHFPKKQK 147
           IK NNLQDP NKN+V CDEKLK ILLGK RV+L +LP+L+KLHFPK+QK
Sbjct: 52  IKTNNLQDPKNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100


Top