BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029078
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   100   2e-19
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...    96   4e-18
ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...    91   1e-16
ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arab...    87   3e-15
ref|NP_001078764.1| RNA polymerase II C-terminal domain phosphat...    86   6e-15

>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
 Frame = -2

Query: 437 MSVTAESPV-SSNSDDFASFLEDELDVAS-DGSPQQDEFEGLNCNLEENQEDDLRIKRRK 264
           MSV  +SPV SS+SDDF +FL+ ELD +S D SP ++  +      ++++   +R KRRK
Sbjct: 1   MSVVTDSPVHSSSSDDFIAFLDAELDASSPDSSPDKEVVK------QDDELQSVRTKRRK 54

Query: 263 LDELEEIV------VVQKSITGESHRDSICPPHPGDMGGMCIRCGQMVDNESSVKVSYIH 102
            + +EE        +V++S+   S  D +C  HPG  G MCIRCGQ +D ES V   YIH
Sbjct: 55  FESIEETEGSTSEGIVKRSLEASSEVD-VCCTHPGSFGNMCIRCGQKLDGESGVTFGYIH 113

Query: 101 KSLRLASDEIAR 66
           K LRL  +EI+R
Sbjct: 114 KGLRLHDEEISR 125


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
 Frame = -2

Query: 437 MSVTAESPV-SSNSDDFASFLEDELDVAS-DGSPQQDEFEGLNCNLEENQEDDLR--IKR 270
           MSV  +SPV SS+SDDF +FL+ ELD +S D SP ++        +E+  +D+L   IKR
Sbjct: 1   MSVVTDSPVHSSSSDDFIAFLDAELDASSPDSSPDKE--------VEKQDDDELESGIKR 52

Query: 269 RKLDELEEIVVVQKSITGESHRDSICPPHPGDMGGMCIRCGQMVDNESSVKVSYIHKSLR 90
           RK + +EE        T  S  + +C  HPG  G MCIRCGQ +D ES V   YIHK LR
Sbjct: 53  RKFESIEE--------TEGSTSEGVCT-HPGSFGNMCIRCGQKLDGESGVTFGYIHKGLR 103

Query: 89  LASDEIAR 66
           L  +EI+R
Sbjct: 104 LHDEEISR 111


>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
 Frame = -2

Query: 437 MSVTAESPV-SSNSDDFASFLEDELDVASDGSPQQDEFEGLNCNLEENQEDDLRIKRRKL 261
           MS+   SP  SS+SDDFA+FL  +LD  S  S   +E EG      +N  + +RIKRRK+
Sbjct: 1   MSLATNSPAHSSSSDDFAAFLAVDLDSHSSDSSPDEETEG------DNNAESVRIKRRKV 54

Query: 260 DELEE-----IVVVQKSITGESHRDSICPPHPGDMGGMCIRCGQMVDNESSVKVSYIHKS 96
           ++LE      +  V++       +  +C  HPG  G MCI CGQ +D ES V   YIHK 
Sbjct: 55  EKLENSEEDIMHEVEEQSLEVLSKQQLCS-HPGSFGNMCIICGQRLDEESGVTFGYIHKE 113

Query: 95  LRLASDEIAR 66
           LRL +DEI R
Sbjct: 114 LRLNNDEINR 123


>ref|XP_002864543.1| hypothetical protein ARALYDRAFT_332090 [Arabidopsis lyrata subsp.
           lyrata] gi|297310378|gb|EFH40802.1| hypothetical protein
           ARALYDRAFT_332090 [Arabidopsis lyrata subsp. lyrata]
          Length = 1006

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
 Frame = -2

Query: 437 MSVTAESPV--SSNSDDFASFLEDELDVASDGS--PQQDEFEGLNCNLEENQEDDLRIKR 270
           MSV ++SPV  SS+SDD A+FL+ ELD ASD S  P ++E E      E+++E  L  KR
Sbjct: 562 MSVASDSPVHSSSSSDDLAAFLDAELDSASDASSGPSEEEEEA-----EDDEESGL--KR 614

Query: 269 RKLDELEEIVVVQKSITGESHRDSICPPHPGDMGGMCIRCGQMVDNESSVKVSYIHKSLR 90
           RKL+ LE   V ++ I   S     C  HPG  G MC  CGQ ++ E+ V   YIHK +R
Sbjct: 615 RKLEHLE--TVDEEEIEEASSSKGEC-QHPGSFGNMCFVCGQKLE-ETGVSFRYIHKEMR 670

Query: 89  LASDEIAR 66
           L  DEI+R
Sbjct: 671 LNEDEISR 678


>ref|NP_001078764.1| RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis
           thaliana] gi|122154038|sp|Q00IB6.1|CPL4_ARATH RecName:
           Full=RNA polymerase II C-terminal domain
           phosphatase-like 4; Short=FCP-like 4; AltName:
           Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4;
           Short=CTD phosphatase-like 4 gi|95115186|gb|ABF55959.1|
           carboxyl-terminal phosphatase-like 4 [Arabidopsis
           thaliana] gi|332009601|gb|AED96984.1| RNA polymerase II
           C-terminal domain phosphatase-like 4 [Arabidopsis
           thaliana]
          Length = 440

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 4/128 (3%)
 Frame = -2

Query: 437 MSVTAESPV--SSNSDDFASFLEDELDVASDGSPQQDEFEGLNCNLEENQEDDLR--IKR 270
           MSV ++SPV  SS+SDD A+FL+ ELD ASD S    E        EE  EDD+   +KR
Sbjct: 1   MSVASDSPVHSSSSSDDLAAFLDAELDSASDASSGPSE--------EEEAEDDVESGLKR 52

Query: 269 RKLDELEEIVVVQKSITGESHRDSICPPHPGDMGGMCIRCGQMVDNESSVKVSYIHKSLR 90
           +KL+ LEE      S  GE         HPG  G MC  CGQ ++ E+ V   YIHK +R
Sbjct: 53  QKLEHLEE----ASSSKGECE-------HPGSFGNMCFVCGQKLE-ETGVSFRYIHKEMR 100

Query: 89  LASDEIAR 66
           L  DEI+R
Sbjct: 101 LNEDEISR 108