BLASTX nr result

ID: Lithospermum22_contig00029070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00029070
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    72   5e-11
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...    72   5e-11
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               70   2e-10
emb|CAN82610.1| hypothetical protein VITISV_021745 [Vitis vinifera]    70   2e-10
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]    70   2e-10

>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
 Frame = -2

Query: 256 HHMSLRP--NPKPSLKKLASHPQAFTVSVVEPEPTCFTQANKCPLWRQAMDEEINVMLRT 83
           H M  R   N +  ++KL  H Q      ++ EPT  TQA K P WR+AM EE + ++R 
Sbjct: 625 HSMQTRAKNNIRKPIQKLNLHIQLS--KPLDLEPTTPTQALKDPKWRKAMSEEYDALVRN 682

Query: 82  NTWSLVPPDPTMIVVGCRWVFRLK*NS 2
            TW LVP +P+  VVGC+W+FR K NS
Sbjct: 683 GTWELVPSNPSQNVVGCKWIFRTKRNS 709


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
            gi|225898008|dbj|BAH30336.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 1459

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = -2

Query: 283  ARTNPQSRVHHMSLRPNPKPSLKKLASHPQAFTVSVVEP---EPTCFTQANKCPLWRQAM 113
            +R+ P    H M  R     +  K  +   + TV++ +P   EP   TQA K   WR AM
Sbjct: 910  SRSQPPKNNHQMKTRSKNNITKPKTKT---SLTVALTQPHLSEPNTVTQALKDKKWRFAM 966

Query: 112  DEEINVMLRTNTWSLVPPDPTMIVVGCRWVFRLK 11
             +E +   R +TW LVPP+PT  +VGCRWVF+LK
Sbjct: 967  SDEFDAQQRNHTWDLVPPNPTQHLVGCRWVFKLK 1000


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/85 (40%), Positives = 48/85 (56%)
 Frame = -2

Query: 265  SRVHHMSLRPNPKPSLKKLASHPQAFTVSVVEPEPTCFTQANKCPLWRQAMDEEINVMLR 86
            +R  H   +PNPK ++          T+  +  EPTC+TQA K P WR+AMD E   + +
Sbjct: 848  TRSKHGISKPNPKYAMHS--------TLLALPLEPTCYTQAAKYPEWREAMDHEFKALQQ 899

Query: 85   TNTWSLVPPDPTMIVVGCRWVFRLK 11
              TW LVPP   M ++  +WVFR+K
Sbjct: 900  AGTWFLVPPSSLMNILPNKWVFRIK 924


>emb|CAN82610.1| hypothetical protein VITISV_021745 [Vitis vinifera]
          Length = 751

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = -2

Query: 250 MSLRPNPKPSLKKLASHPQAFTVSVVEPEPTCFTQANKCPLWRQAMDEEINVMLRTNTWS 71
           +SL  +P  +  K   H +   +     EP  ++QA+K   W QAM+ E   +LR NTWS
Sbjct: 503 LSLNTHPMVTRAKSGIHKKRSFIVQHTTEPRTYSQASKNDSWVQAMNREYQALLRNNTWS 562

Query: 70  LVPPDPTMIVVGCRWVFRLK 11
           LVPP  +  +VGCRW+++LK
Sbjct: 563 LVPPPSSAHIVGCRWIYKLK 582


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
 Frame = -2

Query: 262  RVHHMSLRP-----NPKPSLKKLASHPQAFTVSVVEPEPTCFTQANKCPLWRQAMDEEIN 98
            R+H M+ R       PK  L  ++ HP    +     EPTC TQA   P WR AM  E+ 
Sbjct: 834  RLHKMTTRSMNNIFKPK-QLHLVSKHPIPLAI-----EPTCATQAVNHPQWRDAMSTELT 887

Query: 97   VMLRTNTWSLVPPDPTMIVVGCRWVFRLK 11
             +++  TW LVPP P    VGC+WVFR+K
Sbjct: 888  ALMKHGTWDLVPPLPNCTPVGCKWVFRVK 916


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